RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 NR4A3Q92570 626 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 KRT35Q92764 455 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 C8orf44Q96CB5 159 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 CCDC120Q96HB5 630 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 VPS50Q96JG6 964 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 C19orf43Q9BQ61 176 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 TRIM56Q9BRZ2 755 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 ABHD10Q9NUJ1 306 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 NLE1Q9NVX2 485 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 PIH1D1Q9NWS0 290 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 PLA2G3Q9NZ20 509 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 PTGFRNQ9P2B2 879 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 SUCOQ9UBS9 1254 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 SH3BGRL2Q9UJC5 107 aa13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 KLF2Q9Y5W3 355 aaPredicted RBP13.41□□□□□ -0.26
SMARCA4-206ENST00000538456 MED13LQ71F56 2210 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 SLC5A10A0PJK1 596 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 DYTNA2CJ06 578 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 H7C0S8 307 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 UNC5CO95185 931 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 HPP00738 406 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 UQCRHP07919 91 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 COX6B1P14854 86 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 HTR1EP28566 365 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 NSG1P42857 185 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 RAB28P51157 221 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 EIF3EP60228 445 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 KLC1Q07866 573 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 GRM7Q14831 915 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 ZNF324BQ6AW86 544 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 RPUSD3Q6P087 351 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 DARS2Q6PI48 645 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 ARHGEF18Q6ZSZ5 1173 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 NLRP9Q7RTR0 991 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 MRGPRGQ86SM5 289 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 TTC29Q8NA56 475 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 CFAP61Q8NHU2 1237 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 CDKN2AIPNLQ96HQ2 116 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 SPATA13Q96N96 652 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 IL17FQ96PD4 163 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 LMF1Q96S06 567 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 SELENOSQ9BQE4 189 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 ARNT2Q9HBZ2 717 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 CPAMD8Q8IZJ3 1885 aa13.4□□□□□ -0.26
SMARCA4-206ENST00000538456 ITPR3Q14573 2671 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 QSOX1O00391 747 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 CCL21O00585 134 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 MAP2K7O14733 419 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 ONECUT2O95948 504 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 TPM3P06753 285 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 RBP3P10745 1247 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 CD9P21926 228 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 CTNNA2P26232 953 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 PTGER4P35408 488 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 TNFSF10P50591 281 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 VSX2P58304 361 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 TRIM14Q14142 442 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 TCEAL1Q15170 157 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 SKOR2Q2VWA4 1001 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 ZC3H12BQ5HYM0 836 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 FIGLAQ6QHK4 219 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 TMEM207Q6UWW9 146 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 PACS1Q6VY07 963 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 BNC2Q6ZN30 1099 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 KBTBD2Q8IY47 623 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 SIRT6Q8N6T7 355 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 BRIX1Q8TDN6 353 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 LRRC45Q96CN5 670 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 IGSF5Q9NSI5 407 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 FEZ2Q9UHY8 353 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 C3orf18Q9UK00 162 aa13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMARCA4-206ENST00000538456 CACNA1CQ13936 2221 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 NSG1A0A0A6YYJ2 146 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 TRAV17A0A0B4J275 112 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 VSTM2BA6NLU5 285 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 OR1I1O60431 355 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 MFAP3LO75121 409 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 USP1O94782 785 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 MED26O95402 600 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 OR56A5P0C7T3 313 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 MSNP26038 577 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 CARSP49589 748 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 OCA2Q04671 838 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 HSPA14Q0VDF9 509 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 ITIH4Q14624 930 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 SF1Q15637 639 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 VWA2Q5GFL6 755 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 TCTE1Q5JU00 501 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 YOD1Q5VVQ6 348 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 VRK3Q8IV63 474 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 ZNF808Q8N4W9 903 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 STT3BQ8TCJ2 826 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 SLC22A18Q96BI1 424 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 MIEF2Q96C03 454 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 PPP1R2P1Q96PQ5 205 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 MENTQ9BUN1 341 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 TRIM8Q9BZR9 551 aa13.38□□□□□ -0.27
SMARCA4-206ENST00000538456 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms