RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 GOLGA6L6A8MZA4 724 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 AP3B1O00203 1094 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 ZNF185O15231 689 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 CD3EAPO15446 510 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 MAP3K7O43318 606 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 ONECUT2O95948 504 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 FGGP02679 453 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 CBSLP0DN79 551 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 TPSB2P20231 275 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 NMBRP28336 390 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 CBSP35520 551 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 PTGIRP43119 386 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 MAGEA6P43360 314 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 TTPAP49638 278 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 RAB28P51157 221 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 CRADDP78560 199 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 CCZ1BP86790 482 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 CCZ1P86791 482 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 CDK16Q00536 496 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 HSPA14Q0VDF9 509 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 GBX1Q14549 363 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 NCF4Q15080 339 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 TPSAB1Q15661 275 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 PTCHD3Q3KNS1 767 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 PLEKHN1Q494U1 663 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 SYTL3Q4VX76 610 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 AARS2Q5JTZ9 985 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 TLDC1Q6P9B6 456 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 LRRC8BQ6P9F7 803 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 UNC5DQ6UXZ4 953 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 KRT222Q8N1A0 295 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 MPP5Q8N3R9 675 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 TRIM58Q8NG06 486 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 PROKR1Q8TCW9 393 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 MAIP1Q8WWC4 291 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 BIRC8Q96P09 236 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 DHRS4Q9BTZ2 278 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 NUDT9Q9BW91 350 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 IL22Q9GZX6 179 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 LZTFL1Q9NQ48 299 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 SNX7Q9UNH6 387 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 AP1M2Q9Y6Q5 423 aa9.68□□□□□ -0.86
CLSTN3-203ENST00000534830 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 ISM1B1AKI9 464 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 LRRTM2O43300 516 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 KDM1AO60341 852 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 ZG16O60844 167 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 CNOT3O75175 753 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 OR2B3O76000 313 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 TMEM63AO94886 807 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 CCDC175P0C221 793 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 AGXTP21549 392 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 CD9P21926 228 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 CSE1LP55060 971 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 ADARP55265 1226 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 SESN2P58004 480 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 KCNJ11Q14654 390 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 SSPNQ14714 243 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 ZRSR2Q15696 482 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 TYSND1Q2T9J0 566 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 DEFB110Q30KQ9 67 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 CTSL3PQ5NE16 218 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 ARMC3Q5W041 872 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 MRPL14Q6P1L8 145 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 MED25Q71SY5 747 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 LRRC6Q86X45 466 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 HPS6Q86YV9 775 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 DCUN1D3Q8IWE4 304 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 FAM20CQ8IXL6 584 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 GPR135Q8IZ08 494 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 RASGEF1CQ8N431 466 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 PRELID2Q8N945 189 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 TMEM102Q8N9M5 508 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 OR2L8Q8NGY9 312 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 HMGCLL1Q8TB92 370 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 MFSD3Q96ES6 412 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 LURAP1Q96LR2 239 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 ZNF285Q96NJ3 590 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 PANX3Q96QZ0 392 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 SMAD5Q99717 465 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 TSSK1BQ9BXA7 367 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 SYBUQ9NX95 663 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 BFARQ9NZS9 450 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 GNPTGQ9UJJ9 305 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 ANAPC5Q9UJX4 755 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 SOX13Q9UN79 622 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 PLCL2Q9UPR0 1127 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 KLK4Q9Y5K2 254 aa9.67□□□□□ -0.86
CLSTN3-203ENST00000534830 PKDREJQ9NTG1 2253 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 RASGRF2O14827 1237 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 ZSCAN9O15535 394 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 FKBP9O95302 570 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 MATN4O95460 622 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 C1orf105O95561 183 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 S1PR4O95977 384 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 RPN2P04844 631 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 APOA4P06727 396 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 ITGAXP20702 1163 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 MAGP20916 626 aa9.66□□□□□ -0.86
CLSTN3-203ENST00000534830 MGAT1P26572 445 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms