RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 RANBP9Q96S59 729 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 AGAP2Q99490 1192 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 SH2D3AQ9BRG2 576 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 ABCG4Q9H172 646 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 KAT14Q9H8E8 782 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 TM9SF3Q9HD45 589 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 SLC6A13Q9NSD5 602 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 SPATS2LQ9NUQ6 558 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 HAO1Q9UJM8 370 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 RPS6KA6Q9UK32 745 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 ADAM28Q9UKQ2 775 aa4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 BAZ2AQ9UIF9 1905 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-223ENST00000534442 OBSL1O75147 1896 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 AKAP6Q13023 2319 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 KIR2DS5A0A0G2JLQ3 304 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 A0A1B0GVM2 712 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 A0A1W2PQ09 198 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 DPPA5A6NC42 116 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 FAM90A8PA6NJQ4 464 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 HSPB2A8KAH6 182 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 MKRN2OSH3BPM6 223 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 KIR2DS3K7RE56 304 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 KRT86O43790 486 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 HNRNPCL1O60812 293 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 VENTXO95231 258 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 FAM90A13PP0C7W8 464 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 FAM90A24PP0C7X0 464 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 PRKAR1AP10644 381 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 UNGP13051 313 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 CTPS1P17812 591 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 ITGAXP20702 1163 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 PTGER1P34995 402 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 BUD31P41223 144 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 CDH8P55286 799 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 SNX16P57768 344 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 DPTQ07507 201 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 FHL2Q14192 279 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 HSPB2Q16082 182 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 PLEKHS1Q5SXH7 462 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 MFSD4BQ5TF39 518 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 ASPHD1Q5U4P2 390 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 GKAP1Q5VSY0 366 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 PAPD7Q5XG87 772 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 ISM2Q6H9L7 571 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 TWF2Q6IBS0 349 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 ZNF280DQ6N043 979 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 SARM1Q6SZW1 724 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 SERPINA11Q86U17 422 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 TBC1D26Q86UD7 250 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 SLC25A41Q8N5S1 370 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 BOLLQ8N9W6 283 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 LEMD2Q8NC56 503 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 POMGNT1Q8WZA1 660 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 C19orf60Q96EN9 201 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 FEM1CQ96JP0 617 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 C1orf74Q96LT6 269 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 BBS4Q96RK4 519 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 TKTL2Q9H0I9 626 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 SMARCAD1Q9H4L7 1026 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 AAMDCQ9H7C9 122 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 ECT2Q9H8V3 914 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 KIF9Q9HAQ2 790 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 PAPOLBQ9NRJ5 636 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 KLHL13Q9P2N7 655 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 CNOT8Q9UFF9 292 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 TMEM5Q9Y2B1 443 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 CARD8Q9Y2G2 431 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 FAM96BQ9Y3D0 163 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 LSM4Q9Y4Z0 139 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 INSL5Q9Y5Q6 135 aa4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 SF3B1O75533 1304 aaKnown RBP eCLIP4.45□□□□□ -1.7
ECHDC1-223ENST00000534442 TRBV5-3A0A0A0MS03 114 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 SYNDIG1LA6NDD5 238 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 TTC36A6NLP5 189 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 KLRF2D3W0D1 207 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 HSPB6O14558 160 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 TP73O15350 636 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 SEC14L5O43304 696 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 KLK8O60259 260 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 ERAL1O75616 437 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 MT-CYBP00156 380 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 DNTTP04053 509 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 UBTFL1P0CB47 393 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 PRR35P0CG20 571 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 SRD5A1P18405 259 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 GABRB1P18505 474 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 MCM3P25205 808 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 GCH1P30793 250 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 TNFSF8P32971 234 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 TNFSF9P41273 254 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 F2RL1P55085 397 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 RPL10AP62906 217 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 PRAMEP78395 509 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 DSC1Q08554 894 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 GOLGA8DPQ0D2H9 430 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 STK4Q13043 487 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 AIMP2Q13155 320 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 OLIG2Q13516 323 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 CCDC96Q2M329 555 aa4.44□□□□□ -1.7
ECHDC1-223ENST00000534442 DEFB109BQ30KR1 87 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms