RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PAGE2BQ5JRK9 111 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 C17orf99Q6UX52 265 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 DCP2Q8IU60 420 aaKnown RBP18.87■□□□□ 0.61
CAPN1-226ENST00000533820 GORASP2Q9H8Y8 452 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 POLE4Q9NR33 117 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 C3orf18Q9UK00 162 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 COCHO43405 550 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 ANGPTL1O95841 491 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 EPHA2P29317 976 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 LRRC8DQ7L1W4 858 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 ADHFE1Q8IWW8 467 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 EFHD2Q96C19 240 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-226ENST00000533820 SH3YL1Q96HL8 342 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-226ENST00000533820 FAM126AQ9BYI3 521 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-226ENST00000533820 ALOXE3Q9BYJ1 711 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 P2RY12Q9H244 342 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 GPN2Q9H9Y4 310 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-226ENST00000533820 ORC6Q9Y5N6 252 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 TRIM64BA6NI03 449 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 CD160O95971 181 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 GLUD1P00367 558 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 BCKDHAP12694 445 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 MSH3P20585 1137 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 FAM189BP81408 668 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 CACNG1Q06432 222 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 SLC14A1Q13336 389 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 ARMC12Q5T9G4 340 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 MMAAQ8IVH4 418 aaKnown RBP18.87■□□□□ 0.61
CAPN1-226ENST00000533820 GNPTGQ9UJJ9 305 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 M0R3G1 203 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 PER2O15055 1255 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 FADS2O95864 444 aaKnown RBP18.86■□□□□ 0.61
CAPN1-226ENST00000533820 ELNP15502 786 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 MRPL19P49406 292 aaKnown RBP18.86■□□□□ 0.61
CAPN1-226ENST00000533820 CEP68Q76N32 757 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 CYP4Z1Q86W10 505 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 MAGED4Q96JG8 741 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 TP63Q9H3D4 680 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-226ENST00000533820 MTRRQ9UBK8 725 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 ABCG2Q9UNQ0 655 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 ICMTO60725 284 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 CLDN11O75508 207 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 CLDN7O95471 211 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 NADKO95544 446 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-226ENST00000533820 PTPN2P17706 415 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 CLCN4P51793 760 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 CDK5R2Q13319 367 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 TUBA3CQ13748 450 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 CBX2Q14781 532 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-226ENST00000533820 NATD1Q8N6N6 113 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 OR7A2PQ8NGA2 310 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 KAT8Q9H7Z6 458 aaKnown RBP18.86■□□□□ 0.61
CAPN1-226ENST00000533820 GPRC5BQ9NZH0 403 aa18.86■□□□□ 0.61
CAPN1-226ENST00000533820 TMEFF2Q9UIK5 374 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-226ENST00000533820 IGFBP5P24593 272 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 FLT3LGP49771 235 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 CTF1Q16619 201 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 RUNDC3AQ59EK9 446 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 CARD16Q5EG05 197 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 SOCS4Q8WXH5 440 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 MUL1Q969V5 352 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 DCAF13Q9NV06 445 aaKnown RBP18.85■□□□□ 0.61
CAPN1-226ENST00000533820 CLDN25C9JDP6 229 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 CKBP12277 381 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 ZNF7P17097 686 aaPredicted RBP18.85■□□□□ 0.61
CAPN1-226ENST00000533820 RGS4P49798 205 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 NCS1P62166 190 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 SELENBP1Q13228 472 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 MFSD14CQ5VZR4 134 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 LAIR1Q6GTX8 287 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 DOK6Q6PKX4 331 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 ZDHHC21Q8IVQ6 265 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 RPL3LQ92901 407 aaKnown RBP18.85■□□□□ 0.61
CAPN1-226ENST00000533820 ENPP5Q9UJA9 477 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 C2orf78A6NCI8 922 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 ZNF99A8MXY4 864 aaPredicted RBP18.85■□□□□ 0.61
CAPN1-226ENST00000533820 MANBAO00462 879 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 ADAMTS4O75173 837 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 STC2O76061 302 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 S100A3P33764 101 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 KCNC4Q03721 635 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 GPR17Q13304 367 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 CRHR2Q13324 411 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 ADPRMQ3LIE5 342 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 CST9Q5W186 159 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 VTCN1Q7Z7D3 282 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 ELMOD1Q8N336 334 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 OR5K1Q8NHB7 308 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 RORBQ92753 470 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 EBPLQ9BY08 206 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 CD244Q9BZW8 370 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 CRLS1Q9UJA2 301 aa18.85■□□□□ 0.61
CAPN1-226ENST00000533820 MKI67P46013 3256 aaKnown RBP18.84■□□□□ 0.61
CAPN1-226ENST00000533820 CRYZL1O95825 349 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 HPRP00739 348 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 EPB42P16452 691 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 IFNA8P32881 189 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 TUBA1BP68363 451 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 IRF5Q13568 498 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 CXorf57Q6NSI4 855 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms