RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 ZSCAN1Q8NBB4 408 aa16.87■□□□□ 0.29
NXF1-217ENST00000533671 MCOLN3Q8TDD5 553 aa16.87■□□□□ 0.29
NXF1-217ENST00000533671 PKP4Q99569 1192 aa16.87■□□□□ 0.29
NXF1-217ENST00000533671 TSPYL1Q9H0U9 437 aa16.87■□□□□ 0.29
NXF1-217ENST00000533671 RHOJQ9H4E5 214 aa16.87■□□□□ 0.29
NXF1-217ENST00000533671 CPNE5Q9HCH3 593 aa16.87■□□□□ 0.29
NXF1-217ENST00000533671 ZDHHC18Q9NUE0 388 aa16.87■□□□□ 0.29
NXF1-217ENST00000533671 MYO1CO00159 1063 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 SCRG1O75711 98 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 HIST1H2AGP0C0S8 130 aaPredicted RBP16.86■□□□□ 0.29
NXF1-217ENST00000533671 ZNF28P17035 718 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 HIST1H2ADP20671 130 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 MAGP20916 626 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 RPA3P35244 121 aaPredicted RBP16.86■□□□□ 0.29
NXF1-217ENST00000533671 PNLIPRP1P54315 467 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 TIAL1Q01085 375 aaKnown RBP eCLIP16.86■□□□□ 0.29
NXF1-217ENST00000533671 VAC14Q08AM6 782 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 ARHGAP19Q14CB8 494 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 PWWP2BQ6NUJ5 590 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 CYS1Q717R9 158 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 FAM20CQ8IXL6 584 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 SYTL1Q8IYJ3 562 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 GPR135Q8IZ08 494 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 PPM1NQ8N819 430 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 GALNT6Q8NCL4 622 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 FBXO15Q8NCQ5 510 aaPredicted RBP16.86■□□□□ 0.29
NXF1-217ENST00000533671 FLVCR1-AS1Q8TAF5 88 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 DENND1AQ8TEH3 1009 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 FBF1Q8TES7 1133 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 SMPDL3AQ92484 453 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 ZNF501Q96CX3 271 aaPredicted RBP16.86■□□□□ 0.29
NXF1-217ENST00000533671 CRELD1Q96HD1 420 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 HIST1H2AHQ96KK5 128 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 FMO2Q99518 471 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 OLFM1Q99784 485 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 MIPEPQ99797 713 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 CPNE1Q99829 537 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 HIST1H2AJQ99878 128 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 H2AFJQ9BTM1 129 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 TRIM54Q9BYV2 358 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 LRRC4CQ9HCJ2 640 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 SMYD2Q9NRG4 433 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 ABCF3Q9NUQ8 709 aa16.86■□□□□ 0.29
NXF1-217ENST00000533671 TEX51A0A1B0GUA7 166 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 FAM159BA6NKW6 160 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 CXorf49A8MYA2 514 aaPredicted RBP16.85■□□□□ 0.29
NXF1-217ENST00000533671 GFYI3L273 518 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 FKBP9O95302 570 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 DLGAP3O95886 979 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 NTRK1P04629 796 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 CMPK1P30085 196 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 PHBP35232 272 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 GP5P40197 560 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 ITGA1P56199 1179 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 ABHD18Q0P651 414 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 SP140Q13342 867 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 MAP7Q14244 749 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 FASTKQ14296 549 aaKnown RBP16.85■□□□□ 0.29
NXF1-217ENST00000533671 CYP2A13Q16696 494 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 DEFB110Q30KQ9 67 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 THEMIS2Q5TEJ8 643 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 SUSD1Q6UWL2 747 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 CDHR3Q6ZTQ4 885 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 TIPARPQ7Z3E1 657 aaKnown RBP16.85■□□□□ 0.29
NXF1-217ENST00000533671 GPR155Q7Z3F1 870 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 HMGCLL1Q8TB92 370 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 CLIP3Q96DZ5 547 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 EFHD1Q9BUP0 239 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 ACAT2Q9BWD1 397 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 GPN2Q9H9Y4 310 aaPredicted RBP16.85■□□□□ 0.29
NXF1-217ENST00000533671 PARVBQ9HBI1 364 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 KLHL20Q9Y2M5 609 aa16.85■□□□□ 0.29
NXF1-217ENST00000533671 E7EQ34 232 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 SLC16A5O15375 505 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 CPNE3O75131 537 aaKnown RBP16.84■□□□□ 0.29
NXF1-217ENST00000533671 TIAF1O95411 115 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 SLC16A8O95907 504 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 RHOXF2BP0C7M4 288 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 PSMB5P28074 263 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 SPRP35270 261 aaPredicted RBP16.84■□□□□ 0.29
NXF1-217ENST00000533671 PGGT1BP53609 377 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 SRSF6Q13247 344 aaKnown RBP16.84■□□□□ 0.29
NXF1-217ENST00000533671 NAA25Q14CX7 972 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 ZIC1Q15915 447 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 KBTBD12Q3ZCT8 623 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 FIGLAQ6QHK4 219 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 IFT20Q8IY31 132 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 NKAPQ8N5F7 415 aaKnown RBP16.84■□□□□ 0.29
NXF1-217ENST00000533671 PPFIBP2Q8ND30 876 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 OR1L3Q8NH93 324 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 TSPAN17Q96FV3 270 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 RHOXF2Q9BQY4 288 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 SPRY4Q9C004 299 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 FAM60AQ9NP50 221 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 PADI1Q9ULC6 663 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 PLCL2Q9UPR0 1127 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 PKD1L2Q7Z442 2459 aa16.84■□□□□ 0.29
NXF1-217ENST00000533671 K7ENP7 123 aa16.83■□□□□ 0.28
NXF1-217ENST00000533671 CCNDBP1O95273 360 aa16.83■□□□□ 0.28
NXF1-217ENST00000533671 KLK3P07288 261 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms