RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 KLHL6Q8WZ60 621 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 CREB3L1Q96BA8 519 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 LIN37Q96GY3 246 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 HSPA12BQ96MM6 686 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 CFL2Q9Y281 166 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 TEX46H3BTG2 121 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 CCL16O15467 120 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 PIAS1O75925 651 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 CSKP41240 450 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 KCNC1P48547 511 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 RARRES1P49788 294 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 DUSP6Q16828 381 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 ATG9BQ674R7 924 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 ZNF529Q6P280 563 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 PTCHD4Q6ZW05 846 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 ANKFN1Q8N957 763 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 TMIGD2Q96BF3 282 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 PPP3R2Q96LZ3 170 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 PKP2Q99959 881 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 ZNF696Q9H7X3 374 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 C3orf14Q9HBI5 128 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 RPS10P5Q9NQ39 176 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 ANKRD6Q9Y2G4 727 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 TESMINQ9Y4I5 508 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 PCDHA3Q9Y5H8 950 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 PCDHGA12O60330 932 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 ZNF254O75437 659 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 JRKO75564 520 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 GZMAP12544 262 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 CKMT2P17540 419 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 CTPS1P17812 591 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 RPL4P36578 427 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 NR2C2P49116 596 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 APLP1P51693 650 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 LIMK2P53671 638 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 RAB4BP61018 213 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 FAM209AQ5JX71 171 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 FAM46CQ5VWP2 391 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 GPR180Q86V85 440 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 STK40Q8N2I9 435 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 BOLLQ8N9W6 283 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 GATA6Q92908 595 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 CCDC106Q9BWC9 280 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 FTHL17Q9BXU8 183 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 RBCK1Q9BYM8 510 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 NDRG2Q9UN36 371 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 CDC14AQ9UNH5 594 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 BOLA1Q9Y3E2 137 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 NR2E1Q9Y466 385 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 DOT1LQ8TEK3 1739 aa6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 COL1A1P02452 1464 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-210ENST00000533089 FAM86B1E9PN63 330 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 PPEF2O14830 753 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 ADH1CP00326 375 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 GLUD1P00367 558 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 IMPDH1P20839 514 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 VAMP1P23763 118 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 MAT2AP31153 395 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 CASP3P42574 277 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 FLT3LGP49771 235 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 IRF8Q02556 426 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 SEC23BQ15437 767 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 TARBP2Q15633 366 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 FIGNQ5HY92 759 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 EARS2Q5JPH6 523 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 MSANTD2Q6P1R3 559 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 FAM198BQ6UWH4 519 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 GPR65Q8IYL9 337 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 KIAA0319LQ8IZA0 1049 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 PGAM4Q8N0Y7 254 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 CD99L2Q8TCZ2 262 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 JSRP1Q96MG2 331 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 ZFP3Q96NJ6 502 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 ZNF317Q96PQ6 595 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 CMAHPQ9Y471 501 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 A0A096LPK6 155 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 URADA6NGE7 173 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 SCN2BO60939 215 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 MLYCDO95822 493 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 CSH1P0DML2 217 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 CSH2P0DML3 217 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 CSTF2P33240 577 aaKnown RBP eCLIP6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 HTR7P34969 479 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 WASP42768 502 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 TGM4P49221 684 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 VAMP2P63027 116 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 NFATC3Q12968 1075 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 CDK10Q15131 360 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 NPTX1Q15818 432 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 IL23RQ5VWK5 629 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 RPTNQ6XPR3 784 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 FAM220AQ7Z4H9 259 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 SNX29P2Q8IUI4 249 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 GHDCQ8N2G8 530 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 OR14K1Q8NGZ2 314 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 SELENOMQ8WWX9 145 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 ST8SIA4Q92187 359 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 BARD1Q99728 777 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 FAIM2Q9BWQ8 316 aa6.82□□□□□ -1.32
TGFBR3-210ENST00000533089 KCNK13Q9HB14 408 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms