RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 POMT2Q9UKY4 750 aa10.87□□□□□ -0.67
TRAPPC4-211ENST00000533012 MN1Q10571 1320 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 ARHGEF17Q96PE2 2063 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 PIKFYVEQ9Y2I7 2098 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 FAM149AA5PLN7 773 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 PCNX2A6NKB5 2137 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 SYCE1LA8MT33 242 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 GOLGA8RI6L899 631 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 MAP3K7O43318 606 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 HYAL3O43820 417 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 KERAO60938 352 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 FKBP9O95302 570 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 S100BP04271 92 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 THRAP10827 490 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 UGT2B7P16662 529 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CDH3P22223 829 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 IMPA1P29218 277 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 OAS2P29728 719 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CSTF2P33240 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 RPA3P35244 121 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 GLRBP48167 497 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 KCNC1P48547 511 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CCT5P48643 541 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 ARL4DP49703 201 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 HNMTP50135 292 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 KPNA2P52292 529 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 PPP1CAP62136 330 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZNF844Q08AG5 666 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 NAE1Q13564 534 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 TSTA3Q13630 321 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 FASTKQ14296 549 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CASP8Q14790 479 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 KRT71Q3SY84 523 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CDKL4Q5MAI5 379 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CEP85LQ5SZL2 805 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 THEMIS2Q5TEJ8 643 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 ARHGAP22Q7Z5H3 698 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 B3GNT8Q7Z7M8 397 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 TAX1BP1Q86VP1 789 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CARFQ8N187 725 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 LMNTD1Q8N9Z9 388 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 ALKBH8Q96BT7 664 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 FBXL8Q96CD0 374 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 SCYL1Q96KG9 808 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CCDC74BQ96LY2 380 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 GPR78Q96P69 363 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZIM3Q96PE6 472 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 OR2A14Q96R47 310 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 MAP3K3Q99759 626 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CMKLR1Q99788 373 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 PCBD2Q9H0N5 130 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 PCMTD2Q9NV79 361 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 CD274Q9NZQ7 290 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 LGALS13Q9UHV8 139 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 PCDHB11Q9Y5F2 797 aa10.86□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZFC3H1O60293 1989 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 CEP250Q9BV73 2442 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 TLCD2A6NGC4 264 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 NCF1BA6NI72 391 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 NCF1CA8MVU1 366 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 HGSO14964 777 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 RGS16O15492 202 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 KIF1CO43896 1103 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 PRICKLE3O43900 615 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 GSTA1P08263 222 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 ANKRD34CP0C6C1 535 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 NCF1P14598 390 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 KRT4P19013 534 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 CCND1P24385 295 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 PDX1P52945 283 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 CBX1P83916 185 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 EIF3IQ13347 325 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 SLC5A12Q1EHB4 618 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 SULT1C3Q6IMI6 304 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 CAPN13Q6MZZ7 669 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 SPESP1Q6UW49 350 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 SUSD1Q6UWL2 747 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 MBOAT1Q6ZNC8 495 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 PRSS42Q7Z5A4 293 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 CLEC14AQ86T13 490 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 KMT5CQ86Y97 462 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 LRRC56Q8IYG6 542 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 TCAIMQ8N3R3 496 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 PPFIBP2Q8ND30 876 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 AGBL5Q8NDL9 886 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 RCBTB1Q8NDN9 531 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 OR2A1Q8NGT9 310 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 KLHL6Q8WZ60 621 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 RHBDF1Q96CC6 855 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 MED8Q96G25 268 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 MRPL57Q9BQC6 102 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 TWSG1Q9GZX9 223 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 ATG10Q9H0Y0 220 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 CCDC177Q9NQR7 707 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 ABCF3Q9NUQ8 709 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 INTS7Q9NVH2 962 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZNF358Q9NW07 568 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 NUDT4Q9NZJ9 180 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 SEMA5BQ9P283 1151 aa10.85□□□□□ -0.67
TRAPPC4-211ENST00000533012 CCDC187A0A096LP49 1063 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms