RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 GSTT2BP0CG30 244 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 IDUAP35475 653 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 CLDN8P56748 225 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 AP1S1P61966 158 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 BNC1Q01954 994 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 LRRC74AQ0VAA2 488 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 ZFP69Q49AA0 526 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 RFTN2Q52LD8 501 aaPredicted RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 VARS2Q5ST30 1063 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 CXCL17Q6UXB2 119 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 Q6ZSR9 355 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 SNX20Q7Z614 316 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 RAB43Q86YS6 212 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 DENND1CQ8IV53 801 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 ATAD1Q8NBU5 361 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 C11orf65Q8NCR3 313 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 OR52E4Q8NGH9 312 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 OR2T11Q8NH01 316 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 RHOXF1Q8NHV9 184 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 NDNFQ8TB73 568 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 ZNF566Q969W8 418 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 COL21A1Q96P44 957 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 ATP13A3Q9H7F0 1226 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 RALGAPA2Q2PPJ7 1873 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 CLDN24A6NM45 220 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 DRGXA6NNA5 263 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 H0Y858 1186 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 TMX2-CTNND1H3BSU7 103 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 ZW10O43264 779 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 IGSF6O95976 241 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 PABPC1P11940 636 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 RECQLP46063 649 aaPredicted RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 RPIAP49247 311 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 COPZ1P61923 177 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 NCS1P62166 190 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 SPIBQ01892 262 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 DUOXA1Q1HG43 343 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 PSAPL1Q6NUJ1 521 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 LRRC70Q7Z2Q7 622 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 MRPL10Q7Z7H8 261 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 LRRTM3Q86VH5 581 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 LACC1Q8IV20 430 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 RGL4Q8IZJ4 473 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 NPLOC4Q8TAT6 608 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 PDLIM5Q96HC4 596 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 PSD2Q9BQI7 771 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 SLC32A1Q9H598 525 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 DNAJC11Q9NVH1 559 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 TMEM161AQ9NX61 479 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 THUMPD1Q9NXG2 353 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 SH3BP4Q9P0V3 963 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 GJD2Q9UKL4 321 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 BRWD3Q6RI45 1802 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 MEIS3P2A8K0S8 358 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 LOC730098B7Z3J9 87 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 DYRK3O43781 588 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 KLK8O60259 260 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 NUAK1O60285 661 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 PRMT3O60678 531 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 PDE9AO76083 593 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 TBX18O95935 607 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 MMP2P08253 660 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 BCKDHAP12694 445 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 CTPS1P17812 591 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 IL1RNP18510 177 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 RPL3P39023 403 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 MAGEA10P43363 369 aaPredicted RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 TUFMP49411 452 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 RPS3AP61247 264 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 GPR33Q49SQ1 333 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 PDZK1Q5T2W1 519 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 FAM92BQ6ZTR7 304 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 UBE2R2Q712K3 238 aaPredicted RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 METTL3Q86U44 580 aaKnown RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 SAPCD2Q86UD0 394 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 CYP4Z1Q86W10 505 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 RASAL3Q86YV0 1011 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 HS3ST5Q8IZT8 346 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 FAR1Q8WVX9 515 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 ATL1Q8WXF7 558 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 CMTM7Q96FZ5 175 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 ZFYVE19Q96K21 471 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 YME1L1Q96TA2 773 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 CHCHD6Q9BRQ6 235 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 C2orf49Q9BVC5 232 aaPredicted RBP9.18□□□□□ -0.94
BDNF-216ENST00000532997 TEX12Q9BXU0 123 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 PCDH12Q9NPG4 1184 aa9.18□□□□□ -0.94
BDNF-216ENST00000532997 GLYATL1P3A0A0U1RQE8 302 aa9.17□□□□□ -0.94
BDNF-216ENST00000532997 SNTNA6NMZ2 147 aa9.17□□□□□ -0.94
BDNF-216ENST00000532997 OR1I1O60431 355 aa9.17□□□□□ -0.94
BDNF-216ENST00000532997 CBSLP0DN79 551 aa9.17□□□□□ -0.94
BDNF-216ENST00000532997 POU1F1P28069 291 aa9.17□□□□□ -0.94
BDNF-216ENST00000532997 IFNA8P32881 189 aa9.17□□□□□ -0.94
BDNF-216ENST00000532997 CBSP35520 551 aa9.17□□□□□ -0.94
BDNF-216ENST00000532997 POLR2IP36954 125 aaKnown RBP9.17□□□□□ -0.94
BDNF-216ENST00000532997 ISL1P61371 349 aa9.17□□□□□ -0.94
BDNF-216ENST00000532997 MRPL28Q13084 256 aaKnown RBP9.17□□□□□ -0.94
BDNF-216ENST00000532997 NCF4Q15080 339 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms