RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 HMGCLL1Q8TB92 370 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CT55Q8WUE5 264 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 STARD8Q92502 1023 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 SLC39A7Q92504 469 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 N4BP2L2Q92802 583 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 AKIRIN1Q9H9L7 192 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 TRMT6Q9UJA5 497 aaKnown RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 MRPS18BQ9Y676 258 aaKnown RBP14.81□□□□□ -0.04
CPSF1-210ENST00000532935 BSNQ9UPA5 3926 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CCDC88CQ9P219 2028 aa14.81□□□□□ -0.04
CPSF1-210ENST00000532935 CFAP46Q8IYW2 2715 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 MDC1Q14676 2089 aaKnown RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 EIF4E1BA6NMX2 242 aaKnown RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 TK2O00142 265 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 MYO1CO00159 1063 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 EIF3FO00303 357 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 NKX2-8O15522 239 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 HCRTR1O43613 425 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 ERGP11308 486 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 TCN2P20062 427 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 OAS2P29728 719 aaKnown RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 GABRA4P48169 554 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 TIAL1Q01085 375 aaKnown RBP eCLIP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 CKAP4Q07065 602 aaKnown RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 GPS2Q13227 327 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 DNASE1L3Q13609 305 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 SF1Q15637 639 aaKnown RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 CYP2A13Q16696 494 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 DEFB110Q30KQ9 67 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 RBM20Q5T481 1227 aaKnown RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 CYHR1Q6ZMK1 362 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 ZBED8Q8IZ13 594 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 DNAJC22Q8N4W6 341 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 ASB11Q8WXH4 323 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 EXTL1Q92935 676 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 CLIP3Q96DZ5 547 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 LRFN5Q96NI6 719 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 ACTR5Q9H9F9 607 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 INTS7Q9NVH2 962 aaKnown RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 TAS2R13Q9NYV9 303 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 GRHL1Q9NZI5 618 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 CDC23Q9UJX2 597 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 KCND3Q9UK17 655 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 KLHL20Q9Y2M5 609 aa14.8□□□□□ -0.04
CPSF1-210ENST00000532935 UTP11Q9Y3A2 253 aaKnown RBP14.8□□□□□ -0.04
CPSF1-210ENST00000532935 A0A1W2PPV9 198 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 C21orf140B9A014 251 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 E7EQ34 232 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 H3BMH7 237 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 GFYI3L273 518 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 KATNA1O75449 491 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 FKBP9O95302 570 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 PRKAR1AP10644 381 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 MCM3P25205 808 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 PSMB5P28074 263 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 SKIV2L2P42285 1042 aaKnown RBP14.79□□□□□ -0.04
CPSF1-210ENST00000532935 CDKN2DP55273 166 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 MC1RQ01726 317 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 CDC20Q12834 499 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 FASTKQ14296 549 aaKnown RBP14.79□□□□□ -0.04
CPSF1-210ENST00000532935 TBR1Q16650 682 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 LINC00303Q3SY05 128 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 FAM199XQ6PEV8 388 aaPredicted RBP14.79□□□□□ -0.04
CPSF1-210ENST00000532935 PIWIL4Q7Z3Z4 852 aaKnown RBP14.79□□□□□ -0.04
CPSF1-210ENST00000532935 GPR135Q8IZ08 494 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 DSELQ8IZU8 1212 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 FBXO15Q8NCQ5 510 aaPredicted RBP14.79□□□□□ -0.04
CPSF1-210ENST00000532935 MR1Q95460 341 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 PKP4Q99569 1192 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 RAB17Q9H0T7 212 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 PLCL2Q9UPR0 1127 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 PCDHGA6Q9Y5G7 932 aa14.79□□□□□ -0.04
CPSF1-210ENST00000532935 MEN1O00255 615 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 ZNF749O43361 778 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 OR2B3O76000 313 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 URI1O94763 535 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-210ENST00000532935 KLK3P07288 261 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-210ENST00000532935 RORAP35398 523 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 MGAT5Q09328 741 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 LY6DQ14210 128 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 ARHGAP19Q14CB8 494 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 CRTC2Q53ET0 693 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-210ENST00000532935 FCRL6Q6DN72 434 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 LRRC8EQ6NSJ5 796 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 C16orf46Q6P387 395 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 FIGLAQ6QHK4 219 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 PAQR3Q6TCH7 311 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 ZNF517Q6ZMY9 492 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-210ENST00000532935 GPATCH11Q8N954 259 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 PYROXD1Q8WU10 500 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 EEF1AKMT1Q8WVE0 214 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 CATSPER2Q96P56 530 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 MIPEPQ99797 713 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 GPR87Q9BY21 358 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 SLC7A5P2Q9GIP4 190 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 SPRTNQ9H040 489 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-210ENST00000532935 SAYSD1Q9NPB0 183 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 PCMTD2Q9NV79 361 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 MOCS1Q9NZB8 636 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms