RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 TTC23LQ6PF05 361 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 LRRC70Q7Z2Q7 622 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 KLHDC8AQ8IYD2 350 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 C2orf73Q8N5S3 287 aaPredicted RBP21.29■■□□□ 1
PACSIN3-209ENST00000532457 GPBAR1Q8TDU6 330 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 C3orf30Q96M34 536 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 IMP3Q9NV31 184 aaKnown RBP21.29■■□□□ 1
PACSIN3-209ENST00000532457 RNF11Q9Y3C5 154 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 ANGPTL3Q9Y5C1 460 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 TDRD6O60522 2096 aaKnown RBP21.29■■□□□ 1
PACSIN3-209ENST00000532457 TRBV23OR9-2A0A075B6M9 112 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 A6NCN8 305 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 CCT8L1PA6NM43 557 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 SLCO1B7G3V0H7 640 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 TLR4O00206 839 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 VILLO15195 856 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 ACTR1BP42025 376 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 HK2P52789 917 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 ACTR1AP61163 376 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 THOC6Q86W42 341 aaKnown RBP21.29■■□□□ 1
PACSIN3-209ENST00000532457 DCUN1D3Q8IWE4 304 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 SFTPA2Q8IWL1 248 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 TBC1D21Q8IYX1 336 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 CDYL2Q8N8U2 506 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 SNX31Q8N9S9 440 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 ATL1Q8WXF7 558 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 RAD51AP1Q96B01 352 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 MED8Q96G25 268 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 NTMT1Q9BV86 223 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 PCOLCE2Q9UKZ9 415 aa21.29■■□□□ 1
PACSIN3-209ENST00000532457 E7ENX8 843 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 SDHDO14521 159 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 CSNK1EP49674 416 aaKnown RBP21.28■■□□□ 1
PACSIN3-209ENST00000532457 PKNOX1P55347 436 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 TAP2Q03519 686 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 C1orf61Q13536 156 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 WASH2PQ6VEQ5 465 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 TRPM8Q7Z2W7 1104 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 MILR1Q7Z6M3 343 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 ATP6V1E2Q96A05 226 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 RILPQ96NA2 401 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 CAMK1GQ96NX5 476 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 TRIT1Q9H3H1 467 aaKnown RBP21.28■■□□□ 1
PACSIN3-209ENST00000532457 WASH6PQ9NQA3 447 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 DNAJC11Q9NVH1 559 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 ZNF624Q9P2J8 865 aaPredicted RBP21.28■■□□□ 1
PACSIN3-209ENST00000532457 NCDNQ9UBB6 729 aa21.28■■□□□ 1
PACSIN3-209ENST00000532457 ARHGEF17Q96PE2 2063 aaPredicted RBP21.28■■□□□ 1
PACSIN3-209ENST00000532457 OTCP00480 354 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 CFIP05156 583 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 CCNG1P51959 295 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 PNLIPRP1P54315 467 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 NHLH1Q02575 133 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 PRAMEF14Q5SWL7 426 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 SLC23A3Q6PIS1 610 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 SCIMPQ6UWF3 145 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 SUSD1Q6UWL2 747 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 SYTL1Q8IYJ3 562 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 PHACTR4Q8IZ21 702 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 MAGEC3Q8TD91 643 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 NUSAP1Q9BXS6 441 aaKnown RBP21.27■■□□□ 1
PACSIN3-209ENST00000532457 MEAF6Q9HAF1 191 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 SLC6A14Q9UN76 642 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 SH2B3Q9UQQ2 575 aa21.27■■□□□ 1
PACSIN3-209ENST00000532457 CAPN1P07384 714 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 NPPBP16860 134 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 LSM12Q3MHD2 195 aaKnown RBP21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 TRIM61Q5EBN2 209 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 PARGQ86W56 976 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 TWIST2Q8WVJ9 160 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 CCT6BQ92526 530 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 MAELQ96JY0 434 aaKnown RBP21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 FAR2Q96K12 515 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 SGPP1Q9BX95 441 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 MYLK2Q9H1R3 596 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 BTRCQ9Y297 605 aa21.27■□□□□ 0.99
PACSIN3-209ENST00000532457 UROSP10746 265 aa21.26■□□□□ 0.99
PACSIN3-209ENST00000532457 ERGP11308 486 aa21.26■□□□□ 0.99
PACSIN3-209ENST00000532457 MTHFD1P11586 935 aaKnown RBP21.26■□□□□ 0.99
PACSIN3-209ENST00000532457 PIK3CGP48736 1102 aa21.26■□□□□ 0.99
PACSIN3-209ENST00000532457 PLCD4Q9BRC7 762 aa21.26■□□□□ 0.99
PACSIN3-209ENST00000532457 NMUR2Q9GZQ4 415 aa21.26■□□□□ 0.99
PACSIN3-209ENST00000532457 STN1Q9H668 368 aaKnown RBP21.26■□□□□ 0.99
PACSIN3-209ENST00000532457 XKR8Q9H6D3 395 aa21.26■□□□□ 0.99
PACSIN3-209ENST00000532457 PIP5K1BO14986 540 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 KHNYNO15037 678 aaKnown RBP21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 LRP3O75074 770 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 SYPP08247 313 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 LINC00032P0C843 101 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 JUNDP17535 347 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 ARL1P40616 181 aaPredicted RBP21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 SLC19A1P41440 591 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 HTR6P50406 440 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 INHBCP55103 352 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 TBPL1P62380 186 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 YBX1P67809 324 aaKnown RBP21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 SPRED3Q2MJR0 410 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 PLA2G2CQ5R387 149 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 METTL6Q8TCB7 284 aa21.25■□□□□ 0.99
PACSIN3-209ENST00000532457 TAAR2Q9P1P5 351 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms