RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 Q4G0T1 1027 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 CDONQ4KMG0 1287 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ATF7IP2Q5U623 682 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 DCAF12L2Q5VW00 463 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 TEPPQ6URK8 271 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 SYT10Q6XYQ8 523 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ANO5Q75V66 913 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 RNF144BQ7Z419 303 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ZNF605Q86T29 641 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 FNDC5Q8NAU1 212 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 MCPH1Q8NEM0 835 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 TRPV3Q8NET8 790 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC35B2Q8TB61 432 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 OTUB1Q96FW1 271 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ELMO2Q96JJ3 720 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 LRR1Q96L50 414 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 APMAPQ9HDC9 416 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 EQTNQ9NQ60 294 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ZNF446Q9NWS9 450 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ERVK-18Q9QC07 812 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 STEAP1Q9UHE8 339 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 NDRG4Q9ULP0 352 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 IFT52Q9Y366 437 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 REXO2Q9Y3B8 237 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 MAU2Q9Y6X3 613 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ROCK1Q13464 1354 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ARHGAP31Q2M1Z3 1444 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 RPRD2Q5VT52 1461 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 A0A0U1RRA0 63 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 TTC34A8MYJ7 566 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 PDLIM1O00151 329 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 CLDN4O14493 209 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 LSM1O15116 133 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ADAM12O43184 909 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 MBD3O95983 291 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 STAG3L1P0CL83 205 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 MSR1P21757 451 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC6A2P23975 617 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 EPHA3P29320 983 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 LCN1P31025 176 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 CHI3L1P36222 383 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 TRIM23P36406 574 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC1A6P48664 564 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC26A2P50443 739 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ANXA11P50995 505 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 BCAP31P51572 246 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ARHGDIAP52565 204 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 HSD11B2P80365 405 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 GUCY1B3Q02153 619 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 EGR3Q06889 387 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 HSPB3Q12988 150 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ITGB3BPQ13352 177 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 GPR176Q14439 515 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 HIST2H2ACQ16777 129 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 PARP6Q2NL67 630 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 EDRF1Q3B7T1 1238 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ZMAT1Q5H9K5 638 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 SPECC1LQ69YQ0 1117 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 CLEC6AQ6EIG7 209 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 GRHL2Q6ISB3 625 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 IL20RBQ6UXL0 311 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ZNF704Q6ZNC4 412 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 TPGS1Q6ZTW0 290 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 GDF7Q7Z4P5 450 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 TSPAN33Q86UF1 283 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 LRRC6Q86X45 466 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 FAM131BQ86XD5 332 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 LRRC34Q8IZ02 419 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ZDHHC14Q8IZN3 488 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 PSD4Q8NDX1 1056 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 TNFRSF14Q92956 283 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 ADAM2Q99965 735 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 HAUS8Q9BT25 410 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 MRPL13Q9BYD1 178 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 SHCBP1LQ9BZQ2 653 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 PPIL1Q9Y3C6 166 aa5.08□□□□□ -1.6
ECHDC1-222ENST00000531967 PLXNC1O60486 1568 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ABCC4O15439 1325 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 BLMP54132 1417 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TRAV25A0A0B4J276 109 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 KANSL1LA0AUZ9 987 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 MBLAC1A4D2B0 266 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 RAD51DO75771 328 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 KRT6AP02538 564 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 AMHP03971 560 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 CAPN1P07384 714 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 SPAM1P38567 509 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ADCY8P40145 1251 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 GRIA1P42261 906 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TSPAN5P62079 268 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ARHGAP1Q07960 439 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 KRT33BQ14525 404 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 GPR162Q16538 588 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 CEP78Q5JTW2 689 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 LCN1P1Q5VSP4 162 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TTC27Q6P3X3 843 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 CYB5D1Q6P9G0 228 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 FAM198BQ6UWH4 519 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 PRSS45Q7RTY3 260 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 LRRC75A-AS1Q8N1F1 130 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms