RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 GUCY2DQ02846 1103 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 Q0VFX4 171 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 KRT33BQ14525 404 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 ZRSR2Q15696 482 aaKnown RBP8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 NKAIN1Q4KMZ8 207 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 KAZNQ674X7 775 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 SP5Q6BEB4 398 aaPredicted RBP8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 UNC5AQ6ZN44 842 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 COX15Q7KZN9 410 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 MAATS1Q7Z4T9 603 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 FAM20CQ8IXL6 584 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 PIANPQ8IYJ0 282 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 ZADH2Q8N4Q0 377 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 DNAJC22Q8N4W6 341 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 ZNF655Q8N720 491 aaPredicted RBP8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 LMNTD1Q8N9Z9 388 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 PTERQ96BW5 349 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 LRRC45Q96CN5 670 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 FER1L6-AS2Q96M78 137 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 IP6K3Q96PC2 410 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 SPSB2Q99619 263 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 SLX1AQ9BQ83 275 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 WDR77Q9BQA1 342 aaPredicted RBP8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 FSD1LQ9BXM9 530 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 CHRNA10Q9GZZ6 450 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 RAB17Q9H0T7 212 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 GBA3Q9H227 469 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 RUBCNLQ9H714 662 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 FAM114A2Q9NRY5 505 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 RSPH14Q9UHP6 348 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 FBXL4Q9UKA2 621 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 PLAGL1Q9UM63 463 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 NFU1Q9UMS0 254 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 OSGIN2Q9Y236 505 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 KLHL20Q9Y2M5 609 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 HEBP2Q9Y5Z4 205 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 PRSS21Q9Y6M0 314 aa8.85□□□□□ -0.99
CHMP4A-205ENST00000531158 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 C5orf60A6NFR6 353 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 FAM187AA6NFU0 413 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 ZSCAN9O15535 394 aaPredicted RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 MED26O95402 600 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 CHRM5P08912 532 aaPredicted RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 HBQ1P09105 142 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 PYGMP11217 842 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 ATP1B2P14415 290 aaPredicted RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 ITGA3P26006 1051 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 PSMB4P28070 264 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 ACADLP28330 430 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 RBL1P28749 1068 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 TSFMP43897 325 aaKnown RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 CD151P48509 253 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 CARSP49589 748 aaKnown RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 DCDP81605 110 aaKnown RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 DHX34Q14147 1143 aaKnown RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 TFDP3Q5H9I0 405 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 KIRREL2Q6UWL6 708 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 NAPRTQ6XQN6 538 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 SHISA6Q6ZSJ9 500 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 SNX20Q7Z614 316 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 AMER2Q8N7J2 671 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 PROKR1Q8TCW9 393 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 PPP4R1Q8TF05 950 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 FAR1Q8WVX9 515 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 TFGQ92734 400 aaPredicted RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 P3H4Q92791 437 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 LURAP1Q96LR2 239 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 RUNDC3BQ96NL0 473 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 VAT1Q99536 393 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 COPS8Q99627 209 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 MENTQ9BUN1 341 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 FAM129AQ9BZQ8 928 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 SLC7A5P2Q9GIP4 190 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 TSPYL1Q9H0U9 437 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 MVB12BQ9H7P6 319 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 ATP13A2Q9NQ11 1180 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 DDX56Q9NY93 547 aaKnown RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 IFT80Q9P2H3 777 aaPredicted RBP8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 CRLS1Q9UJA2 301 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 HS3ST3B1Q9Y662 390 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 AP1M2Q9Y6Q5 423 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 GTF3C1Q12789 2109 aa8.84□□□□□ -0.99
CHMP4A-205ENST00000531158 SPG11Q96JI7 2443 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 C2orf81A6NN90 581 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 HMGB1P1B2RPK0 211 aaPredicted RBP8.83□□□□□ -1
CHMP4A-205ENST00000531158 PEX12O00623 359 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 ONECUT2O95948 504 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 EDN3P14138 238 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 MMP11P24347 488 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 CTNNA2P26232 953 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 ACRV1P26436 265 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 ECHS1P30084 290 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 MC4RP32245 332 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 SLC1A1P43005 524 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 TDGF1P3P51864 188 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 AIMP2Q13155 320 aaKnown RBP8.83□□□□□ -1
CHMP4A-205ENST00000531158 TFDP2Q14188 446 aa8.83□□□□□ -1
CHMP4A-205ENST00000531158 ELOAQ14241 798 aaKnown RBP8.83□□□□□ -1
CHMP4A-205ENST00000531158 SPARCL1Q14515 664 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms