RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 GPR17Q13304 367 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 CHRDL2Q6WN34 429 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 SYVN1Q86TM6 617 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 C15orf40Q8WUR7 153 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 TMEM40Q8WWA1 233 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 FBXL18Q96ME1 805 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 TUBGCP5Q96RT8 1024 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 ABCB10Q9NRK6 738 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 GSC2O15499 205 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 HCN1O60741 890 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 TCEA3O75764 348 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 FOSL2P15408 326 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 CXCR1P25024 350 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 MAGEA11P43364 429 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 KCNC3Q14003 757 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 SGCBQ16585 318 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 ARSIQ5FYB1 569 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 PRAMEF14Q5SWL7 426 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 PRAMEF13Q5VWM6 474 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 ARHGAP22Q7Z5H3 698 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 C12orf40Q86WS4 652 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 SPPL2CQ8IUH8 684 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 SMG8Q8ND04 991 aaKnown RBP8.28□□□□□ -1.08
CTNND1-225ENST00000530094 SMPDL3AQ92484 453 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 FAM83CQ9BQN1 747 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 P2RX2Q9UBL9 471 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 PGAP2Q9UHJ9 254 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 CNOT6Q9ULM6 557 aaKnown RBP8.28□□□□□ -1.08
CTNND1-225ENST00000530094 PCDHGB2Q9Y5G2 931 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 NOX1Q9Y5S8 564 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 UPK3BL1B0FP48 263 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 UPK3BL2E5RIL1 263 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 CXCR6O00574 342 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 PCDH7O60245 1069 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 OR4F21O95013 312 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 GADD45GO95257 159 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 ARCN1P48444 511 aaKnown RBP8.28□□□□□ -1.08
CTNND1-225ENST00000530094 PCDH1Q08174 1060 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 SYPL2Q5VXT5 272 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 FSTL4Q6MZW2 842 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 ZNF783Q6ZMS7 281 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 CMTR2Q8IYT2 770 aaKnown RBP8.28□□□□□ -1.08
CTNND1-225ENST00000530094 OR2L5Q8NG80 312 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 KLK6Q92876 244 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 KIAA1143Q96AT1 154 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-225ENST00000530094 TDP1Q9NUW8 608 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 EIF2B4Q9UI10 523 aaKnown RBP8.28□□□□□ -1.08
CTNND1-225ENST00000530094 CDH22Q9UJ99 828 aa8.28□□□□□ -1.08
CTNND1-225ENST00000530094 TNFRSF10BO14763 440 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 FFAR2O15552 330 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 AP2A2O94973 939 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 FADS2O95864 444 aaKnown RBP8.27□□□□□ -1.08
CTNND1-225ENST00000530094 SLC7A1P30825 629 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 RPS9P46781 194 aaKnown RBP8.27□□□□□ -1.08
CTNND1-225ENST00000530094 IL18Q14116 193 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 MCFD2Q8NI22 146 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 IPCEF1Q8WWN9 437 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-225ENST00000530094 SLC13A3Q8WWT9 602 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 CHID1Q9BWS9 393 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 COQ4Q9Y3A0 265 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 TIMM22Q9Y584 194 aa8.27□□□□□ -1.08
CTNND1-225ENST00000530094 KAT6AQ92794 2004 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 ANXA2P2A6NMY6 339 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 BTN3A3O00478 584 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 ANXA2P07355 339 aaKnown RBP8.27□□□□□ -1.09
CTNND1-225ENST00000530094 ZNF20P17024 532 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 CSTF2P33240 577 aaKnown RBP eCLIP8.27□□□□□ -1.091e-7■■□□□ 12.3
CTNND1-225ENST00000530094 CLCN4P51793 760 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 PGDP52209 483 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 HSF2Q03933 536 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 HERC3Q15034 1050 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 C10orf62Q5T681 223 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-225ENST00000530094 PNLDC1Q8NA58 520 aaKnown RBP8.27□□□□□ -1.09
CTNND1-225ENST00000530094 PLA2G15Q8NCC3 412 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 SPATA22Q8NHS9 363 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 UFD1Q92890 307 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 BORCS5Q969J3 196 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 KXD1Q9BQD3 176 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 SGIP1Q9BQI5 828 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 A0A1W2PRB8 838 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 TULP2O00295 520 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 SASH3O75995 380 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 RLN1P04808 185 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 CYP17A1P05093 508 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 S100A9P06702 114 aaKnown RBP8.27□□□□□ -1.09
CTNND1-225ENST00000530094 ALPIP09923 528 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 HERVK_113P63132 956 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 TLR1Q15399 786 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 MYLK3Q32MK0 819 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 ARL13AQ5H913 290 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-225ENST00000530094 LRRC73Q5JTD7 316 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 GPR107Q5VW38 600 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 ANKLE1Q8NAG6 615 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 OR2AP1Q8NGE2 309 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 AGAP11Q8TF27 550 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 KLHL6Q8WZ60 621 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 IFT27Q9BW83 186 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 ERVK-6Q9BXR3 956 aa8.27□□□□□ -1.09
CTNND1-225ENST00000530094 SMOC2Q9H3U7 446 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms