RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ERN1O75460 977 aaKnown RBP14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 GMNNO75496 209 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 MYO1DO94832 1006 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 BCKDHAP12694 445 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 PSMA4P25789 261 aaKnown RBP14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 PEX2P28328 305 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 HSD17B2P37059 387 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 MTHFRP42898 656 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 GSK3BP49841 420 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 LIPEQ05469 1076 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 NAE1Q13564 534 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 CAPRIN1Q14444 709 aaKnown RBP14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 XKR6Q5GH73 641 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 PIP5KL1Q5T9C9 394 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 PNCKQ6P2M8 343 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 TICAM1Q8IUC6 712 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 TRAPPC5Q8IUR0 188 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 TMEM102Q8N9M5 508 aaPredicted RBP14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 OR9A1PQ8NGU1 263 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 TESCQ96BS2 214 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 COX14Q96I36 57 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 FCRL1Q96LA6 429 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 PKP4Q99569 1192 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 SLC39A3Q9BRY0 314 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 FARSBQ9NSD9 589 aaKnown RBP14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 ATXN10Q9UBB4 475 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 MAGEL2Q9UJ55 1249 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 COQ6Q9Y2Z9 468 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 PCDHB3Q9Y5E6 796 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 DOCK8Q8NF50 2099 aa14.35□□□□□ -0.11
ECHDC1-220ENST00000528402 TMEM202A6NGA9 273 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 DENRO43583 198 aaKnown RBP14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 POP7O75817 140 aaKnown RBP14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 RPN2P04844 631 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 PGRP06401 933 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 AMD1P17707 334 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 ITPKAP23677 461 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 GDI1P31150 447 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 GRIA3P42263 894 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 METAP1P53582 386 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 CNTN1Q12860 1018 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 LAPTM5Q13571 262 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 GRM2Q14416 872 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 SFT2D3Q587I9 215 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 FKBP9P1Q75LS8 142 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 KIAA2013Q8IYS2 634 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 WDR20Q8TBZ3 569 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 GATA6Q92908 595 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 PYCR2Q96C36 320 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 WDR34Q96EX3 536 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 SLC45A3Q96JT2 553 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 MYADMQ96S97 322 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 PKP2Q99959 881 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 PLA2G2FQ9BZM2 168 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 KCNH6Q9H252 994 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 EHD1Q9H4M9 534 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 INTS7Q9NVH2 962 aaKnown RBP14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 SCOCQ9UIL1 159 aa14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 RUVBL1Q9Y265 456 aaKnown RBP14.34□□□□□ -0.11
ECHDC1-220ENST00000528402 DHRS12A0PJE2 317 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 C9JVG2 144 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 KCNJ13O60928 360 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 RNASEH2AO75792 299 aaKnown RBP14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 BMP2P12643 396 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 PRPS1L1P21108 318 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 IMPA1P29218 277 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 S100A3P33764 101 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 PREPP48147 710 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 C21orf58P58505 322 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 SRSF11Q05519 484 aaKnown RBP14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 CST6Q15828 149 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 HIST2H2ACQ16777 129 aaPredicted RBP14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 PAGE2BQ5JRK9 111 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 HABP4Q5JVS0 413 aaKnown RBP14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 EGFLAMQ63HQ2 1017 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 HIST2H2AA3Q6FI13 130 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 SDE2Q6IQ49 451 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 SLC2A7Q6PXP3 512 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 ANKFN1Q8N957 763 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 PHC3Q8NDX5 983 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 GTF2H4Q92759 462 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 UBE2E3Q969T4 207 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 MTFMTQ96DP5 389 aaKnown RBP14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 HBEGFQ99075 208 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 EFCAB11Q9BUY7 163 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 S1PR5Q9H228 398 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 SPATA6Q9NWH7 488 aaPredicted RBP14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 LMCD1Q9NZU5 365 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 VPS29Q9UBQ0 182 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 MAN2B2Q9Y2E5 1009 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 DYRK1BQ9Y463 629 aa14.33□□□□□ -0.11
ECHDC1-220ENST00000528402 EPOPA6NHQ4 379 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF839A8K0R7 811 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ARPC2O15144 300 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PI15O43692 258 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PIM1P11309 404 aaPredicted RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF8P17098 575 aaPredicted RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ACADLP28330 430 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PDHA2P29803 388 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms