RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 PAPSS2O95340 614 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-218ENST00000528232 ANXA4P09525 319 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-218ENST00000528232 AOC1P19801 751 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 PROZP22891 400 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 PSMD8P48556 350 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 MLLT6P55198 1093 aaPredicted RBP7.07□□□□□ -1.28
CTNND1-218ENST00000528232 RBBP4Q09028 425 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 NAE1Q13564 534 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 HES5Q5TA89 166 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 C6orf89Q6UWU4 347 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 MAMDC4Q6UXC1 1216 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 WDTC1Q8N5D0 677 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 OR7G1Q8NGA0 311 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 SLC35C2Q9NQQ7 365 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 CD84Q9UIB8 345 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 ADAMTS5Q9UNA0 930 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 MYH4Q9Y623 1939 aa7.07□□□□□ -1.28
CTNND1-218ENST00000528232 PRAMEF33A0A0G2JMD5 474 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 BCKDKO14874 412 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 KDELR3O43731 214 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 PRAMEF10O60809 474 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 PTX3P26022 381 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 TAGLNQ01995 201 aaKnown RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ACSBG2Q5FVE4 666 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 EMC10Q5UCC4 262 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 RPTNQ6XPR3 784 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 DEF8Q6ZN54 512 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 SMG7Q92540 1137 aaKnown RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 C1orf74Q96LT6 269 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 NEDD4LQ96PU5 975 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 CRISPLD1Q9H336 500 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ZNF358Q9NW07 568 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 MAN2B2Q9Y2E5 1009 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 YIPF1Q9Y548 306 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 SCN7AQ01118 1682 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 TYROBPO43914 113 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 SSX5O60225 188 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 GPR32O75388 356 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 HAPLN1P10915 354 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ZNF3P17036 446 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 AMD1P17707 334 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ITGA3P26006 1051 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 DDX6P26196 483 aaKnown RBP eCLIP7.06□□□□□ -1.281e-7■■□□□ 13.6
CTNND1-218ENST00000528232 SSR2P43308 183 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 SRSF11Q05519 484 aaKnown RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 FOXM1Q08050 763 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 CHIT1Q13231 466 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 E2F2Q14209 437 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 PCLAFQ15004 111 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 VMACQ2NL98 169 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 KCTD8Q6ZWB6 473 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 DNAJB7Q7Z6W7 309 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 C2CD4AQ8NCU7 369 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 KAT2AQ92830 837 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 COL26A1Q96A83 441 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 EBF3Q9H4W6 596 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 POPDC3Q9HBV1 291 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ZNF334Q9HCZ1 680 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 MKS1Q9NXB0 559 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 B3GNT3Q9Y2A9 372 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 MRPS7Q9Y2R9 242 aaKnown RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ALG5Q9Y673 324 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 CACNA1SQ13698 1873 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 K7EPI3 171 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 AIREO43918 545 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 UGT2B17O75795 530 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 TBX18O95935 607 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 HLA-DQA2P01906 255 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 AHSGP02765 367 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 CBSLP0DN79 551 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 CBSP35520 551 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 SEPHS1P49903 392 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 EEFSECP57772 596 aaKnown RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 MYBPC1Q00872 1141 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 NRG1Q02297 640 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 DPY19L1Q2PZI1 675 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 SPATS1Q496A3 300 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 MS4A13Q5J8X5 152 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 GPRC6AQ5T6X5 926 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 B3GNT9Q6UX72 402 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 PTCHD4Q6ZW05 846 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 DNAJA4Q8WW22 397 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ASB9Q96DX5 294 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 CDKN2AIPNLQ96HQ2 116 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 FRMD6Q96NE9 622 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 FAM129BQ96TA1 746 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 RETREG1Q9H6L5 497 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 INTS7Q9NVH2 962 aaKnown RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 SLC39A1Q9NY26 324 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 PDP1Q9P0J1 537 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-218ENST00000528232 GULP1Q9UBP9 304 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ERVW-1Q9UQF0 538 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 A0A0J9YVX5 310 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 CLCA1A8K7I4 914 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 H0Y858 1186 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 STX16-NPEPL1H3BU86 382 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 J3KR12 359 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 STX16O14662 325 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ECI2O75521 394 aa7.06□□□□□ -1.28
CTNND1-218ENST00000528232 ERAL1O75616 437 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms