RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 OLA1Q9NTK5 396 aaKnown RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 WBP4O75554 376 aaKnown RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 BEST1O76090 585 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 MLYCDO95822 493 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 CD72P21854 359 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 SSTR4P31391 388 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 SCNN1AP37088 669 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 HMGCS2P54868 508 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 PTCHD3Q3KNS1 767 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 RGMBQ6NW40 437 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 PAQR3Q6TCH7 311 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 UNC93AQ86WB7 457 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 COLEC11Q9BWP8 271 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 ASPNQ9BXN1 380 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 FBXW11Q9UKB1 542 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 TRAV19A0A0A6YYK7 116 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 TEX51A0A1B0GUA7 166 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 SMIM30A4D0T7 59 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 NT5C1B-RDH14C9J2C7 533 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 H3BM21 787 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 M0R129 80 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 FFAR3O14843 346 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 GPR42O15529 346 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 TSPAN3O60637 253 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 PDE9AO76083 593 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 POU3F3P20264 500 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 CD86P42081 329 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 MLLT3P42568 568 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 GZMKP49863 264 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 OLR1P78380 273 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 ST3GAL4Q11206 333 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 CSTF3Q12996 717 aaKnown RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 CAMK2GQ13555 558 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 TBCEQ15813 527 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 ENTHD1Q8IYW4 607 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 OR52B6Q8NGF0 335 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 DIRAS2Q96HU8 199 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 TNIP3Q96KP6 325 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 MRGPRX2Q96LB1 330 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 TTLL2Q9BWV7 592 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 NUSAP1Q9BXS6 441 aaKnown RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 C11orf54Q9H0W9 315 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 C1orf109Q9NX04 203 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 SPASTQ9UBP0 616 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 COL1A2P08123 1366 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 SHOXO15266 292 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 PEX10O60683 326 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 MOCS2O96007 188 aaPredicted RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 ADORA3P0DMS8 318 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 DDCP20711 480 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 EFNA1P20827 205 aaPredicted RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 SLC19A1P41440 591 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 MAGEA11P43364 429 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 NKX3-2P78367 333 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 HOXC5Q00444 222 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 TMEM132BQ14DG7 1078 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 TATDN3Q17R31 274 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 INTS6LQ5JSJ4 861 aaKnown RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 MRNIPQ6NTE8 343 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 UBE2Q1Q7Z7E8 422 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 EFHBQ8N7U6 833 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 PDLIM5Q96HC4 596 aaKnown RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 CCDC115Q96NT0 180 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 ZNF556Q9HAH1 456 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 SLC23A1Q9UHI7 598 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 TRAPPC2P0DI81 140 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 TRAPPC2BP0DI82 140 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 TNNI3P19429 210 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 DNAJA1P31689 397 aaKnown RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 RFTN2Q52LD8 501 aaPredicted RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 KIAA0319Q5VV43 1072 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 ATOH8Q96SQ7 321 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 C2orf49Q9BVC5 232 aaPredicted RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 RAD18Q9NS91 495 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 NDRG4Q9ULP0 352 aaKnown RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 DUSP12Q9UNI6 340 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 KCNE2Q9Y6J6 123 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 CIB4A0PJX0 185 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 FABP12A6NFH5 140 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 B4DXG7 233 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 FPR1P21462 350 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 TGM4P49221 684 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 FKBP1AP62942 108 aaKnown RBP12.19□□□□□ -0.46
TSKU-203ENST00000527881 FBXO43Q4G163 708 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 KCTD20Q7Z5Y7 419 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 VTCN1Q7Z7D3 282 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 C19orf18Q8NEA5 215 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 FBLIM1Q8WUP2 373 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 COL21A1Q96P44 957 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 ABCG8Q9H221 673 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 KLK14Q9P0G3 267 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 MALT1Q9UDY8 824 aa12.19□□□□□ -0.46
TSKU-203ENST00000527881 CHRM5P08912 532 aaPredicted RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 ZNF250P15622 560 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 ENPP1P22413 925 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 SETMARQ53H47 684 aaPredicted RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 FBXO47Q5MNV8 452 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms