RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CD247P20963 164 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 KLRK1P26718 216 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 HTR2BP41595 481 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MVKQ03426 396 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SLC18A2Q05940 514 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 RRP1BQ14684 758 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 FASTKD3Q14CZ7 662 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SEC23BQ15437 767 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 UGT8Q16880 541 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 LRIF1Q5T3J3 769 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 UBAP2Q5T6F2 1119 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF767PQ75MW2 155 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF410Q86VK4 478 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF101Q8IZC7 436 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 OR2AP1Q8NGE2 309 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 KCNN1Q92952 543 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 COG8Q96MW5 612 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 UROC1Q96N76 676 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TRMOQ9BU70 441 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 WDR6Q9NNW5 1121 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 AK9Q5TCS8 1911 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 DUOX1Q9NRD9 1551 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 A0A0J9YYE9 177 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF891A8MT65 544 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 WASH3PC4AMC7 463 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TNFRSF10AO00220 468 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 AKAP3O75969 853 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ATE1O95260 518 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 PRAMEF12O95522 483 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CXCL14O95715 111 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 AMD1P17707 334 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ATP6V0D1P61421 351 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 BCL2L1Q07817 233 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 BNIP3Q12983 259 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TEAD4Q15561 434 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 GRIK4Q16099 956 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 FAM153CQ494X1 144 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ZBED5Q49AG3 693 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 IQCCQ4KMZ1 466 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ECHDC2Q86YB7 292 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ADGRF4Q8IZF3 695 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CENPSQ8N2Z9 138 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ARL14Q8N4G2 192 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ZSCAN4Q8NAM6 433 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SLC22A8Q8TCC7 542 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MFSD3Q96ES6 412 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CPNE2Q96FN4 548 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CNTNAP3BQ96NU0 1288 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 AGAP2Q99490 1192 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SLC30A2Q9BRI3 323 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 DPCDQ9BVM2 203 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 YTHDF1Q9BYJ9 559 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 LY9Q9HBG7 655 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ATP13A1Q9HD20 1204 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 PLK2Q9NYY3 685 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ZDHHC9Q9Y397 364 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 WASF2Q9Y6W5 498 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CNTNAP2Q9UHC6 1331 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 PIGBOS1A0A0B4J2F0 54 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TEX51A0A1B0GUA7 166 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SH3PXD2BA1X283 911 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SLC35F4A4IF30 521 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 WTIPA6NIX2 430 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SMAD9O15198 467 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 XPNPEP2O43895 674 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MFSD11O43934 449 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 KCNJ13O60928 360 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 NME6O75414 186 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SCAF4O95104 1147 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TGDSO95455 350 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 SCGB1D1O95968 90 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MAPK3P27361 379 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 GABRB2P47870 512 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 RAB7AP51149 207 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TBX2Q13207 712 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MAPK14Q16539 360 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 C9orf64Q5T6V5 341 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ARMC12Q5T9G4 340 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 GPR153Q6NV75 609 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 DOK6Q6PKX4 331 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 ALYREFQ86V81 257 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 LNX2Q8N448 690 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 TRAPPC12Q8WVT3 735 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 LPGAT1Q92604 370 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 HEPHQ9BQS7 1158 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MCMBPQ9BTE3 642 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CPVLQ9H3G5 476 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 PRDM16Q9HAZ2 1276 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 C11orf16Q9NQ32 467 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 CDH22Q9UJ99 828 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 PCTPQ9UKL6 214 aa7.1□□□□□ -1.27
CTNND1-216ENST00000527467 MRPS23Q9Y3D9 190 aaKnown RBP7.1□□□□□ -1.27
CTNND1-216ENST00000527467 HYKKA2RU49 373 aa7.09□□□□□ -1.27
CTNND1-216ENST00000527467 EFCAB7A8K855 629 aa7.09□□□□□ -1.27
CTNND1-216ENST00000527467 PRR5-ARHGAP8B1AHC4 643 aa7.09□□□□□ -1.27
CTNND1-216ENST00000527467 DLGAP1O14490 977 aa7.09□□□□□ -1.27
CTNND1-216ENST00000527467 LRATO95237 230 aa7.09□□□□□ -1.27
CTNND1-216ENST00000527467 ABHD2P08910 425 aa7.09□□□□□ -1.27
CTNND1-216ENST00000527467 CHRM5P08912 532 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-216ENST00000527467 AMPD1P23109 780 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms