RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TRAV24A0A0B4J272 114 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 HNRNPCL2B2RXH8 293 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 SYNGR3O43761 229 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 SPP1P10451 314 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 HSPA8P11142 646 aaKnown RBP4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 GP1BBP13224 206 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 LBPP18428 481 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 HNF4AP41235 474 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 KCNJ1P48048 391 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 PITX1P78337 314 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 MBTD1Q05BQ5 628 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 ZNF415Q09FC8 603 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 HYAL1Q12794 435 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 SF3B4Q15427 424 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 DUOXA1Q1HG43 343 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 LACTB2Q53H82 288 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 ELFN2Q5R3F8 820 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 BTNL8Q6UX41 500 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 CUZD1Q86UP6 607 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 HOOK3Q86VS8 718 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 LONP2Q86WA8 852 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 RASGEF1AQ8N9B8 481 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 PPFIBP2Q8ND30 876 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 SEPT1Q8WYJ6 367 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 TEKT1Q969V4 418 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 CABS1Q96KC9 395 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 FAM20AQ96MK3 541 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 ATP6V0BQ99437 205 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 CACNG6Q9BXT2 260 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 LRRC4Q9HBW1 653 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 TCF7L2Q9NQB0 619 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 ABCB8Q9NUT2 735 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 ITGA11Q9UKX5 1188 aa4.33□□□□□ -1.72
HMGB1P1-201ENST00000522557 PLSCR5A0PG75 271 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 DENND3A2RUS2 1198 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 C2CD4DB7Z1M9 353 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 O00370 1275 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 PLOD2O00469 737 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 PRAF2O60831 178 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 RTN2O75298 545 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 GSRP00390 522 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 CD59P13987 128 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 CKMT2P17540 419 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 EPHA2P29317 976 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 GNL1P36915 607 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 MTCP1P56278 107 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 GSDMDP57764 484 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 CTU2Q2VPK5 515 aaKnown RBP4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 SLC39A12Q504Y0 691 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 ZNF789Q5FWF6 425 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 FAM76BQ5HYJ3 339 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 ZNF770Q6IQ21 691 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 TATDN1Q6P1N9 297 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 PRSS55Q6UWB4 352 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 TUBA1AQ71U36 451 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 ARHGAP22Q7Z5H3 698 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 NRARPQ7Z6K4 114 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 COMMD2Q86X83 199 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 TUSC5Q8IXB3 177 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 MMD2Q8IY49 270 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 APCDD1Q8J025 514 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 MSANTD4Q8NCY6 345 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 RDM1Q8NG50 284 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 OR2T12Q8NG77 320 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 HSD17B8Q92506 261 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 SLC47A1Q96FL8 570 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 FAM71F1Q96KD3 344 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 TUBA1CQ9BQE3 449 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 FKRPQ9H9S5 495 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 APOBEC3GQ9HC16 384 aaKnown RBP4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 IARS2Q9NSE4 1012 aaKnown RBP4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 ADPRHL2Q9NX46 363 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 STK26Q9P289 416 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 KIAA1210Q9ULL0 1709 aa4.32□□□□□ -1.72
HMGB1P1-201ENST00000522557 A0A087WYN8 130 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 A0A1W2PN81 502 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 A0A1W2PS18 150 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 SLC33A1O00400 549 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 XPNPEP2O43895 674 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 PRKNO60260 465 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 NME6O75414 186 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 ZNF432O94892 652 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 PGLSO95336 258 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 BAG3O95817 575 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 OLFM2O95897 454 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 SP100P23497 879 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 CHRNA7P36544 502 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 PSMC4P43686 418 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 NR2C2P49116 596 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 ACTN3Q08043 901 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 PPP2R5CQ13362 524 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 PKN2Q16513 984 aaKnown RBP4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 KBTBD12Q3ZCT8 623 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 MCMDC2Q4G0Z9 681 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 CYP4A22Q5TCH4 519 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 CYB5D1Q6P9G0 228 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 CREBRFQ8IUR6 639 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 PLD3Q8IV08 490 aa4.31□□□□□ -1.72
HMGB1P1-201ENST00000522557 UNC45BQ8IWX7 931 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms