RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 NLGN3Q9NZ94 848 aa12.96□□□□□ -0.33
CLK4-210ENST00000522136 SPATA7Q9P0W8 599 aa12.96□□□□□ -0.33
CLK4-210ENST00000522136 SNRNP200O75643 2136 aaKnown RBP12.96□□□□□ -0.33
CLK4-210ENST00000522136 ASXL3Q9C0F0 2248 aa12.96□□□□□ -0.33
CLK4-210ENST00000522136 A0A1W2PPV9 198 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 K7EPI3 171 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 UBFD1O14562 309 aaKnown RBP12.96□□□□□ -0.34
CLK4-210ENST00000522136 YKT6O15498 198 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 SIGLEC6O43699 453 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 EPORP19235 508 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 PSMB5P28074 263 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 LSP1P33241 339 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 NBL1P41271 181 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 RAB28P51157 221 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 SEC24CP53992 1094 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 YBX1P67809 324 aaKnown RBP12.96□□□□□ -0.34
CLK4-210ENST00000522136 CLCQ05315 142 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 GTF2H2Q13888 395 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 RCN2Q14257 317 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 ARHGAP19Q14CB8 494 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 ATG16L1Q676U5 607 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 TMEM26Q6ZUK4 368 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 AMIGO1Q86WK6 493 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 DCBLD1Q8N8Z6 715 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 SNX31Q8N9S9 440 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 OR4C6Q8NH72 309 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 SORT1Q99523 831 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 ACAT2Q9BWD1 397 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 DRC3Q9H069 523 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 SRMSQ9H3Y6 488 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 CCDC134Q9H6E4 229 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 TNFRSF12AQ9NP84 129 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 SH2B3Q9UQQ2 575 aa12.96□□□□□ -0.34
CLK4-210ENST00000522136 FRYLO94915 3013 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 OTOGLQ3ZCN5 2332 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 KLF11O14901 512 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 NPHS1O60500 1241 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 SNNO75324 88 aaPredicted RBP12.95□□□□□ -0.34
CLK4-210ENST00000522136 H2AFYO75367 372 aaKnown RBP12.95□□□□□ -0.34
CLK4-210ENST00000522136 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
CLK4-210ENST00000522136 GRK2P25098 689 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 PRDX3P30048 256 aaKnown RBP12.95□□□□□ -0.34
CLK4-210ENST00000522136 FASLGP48023 281 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 RP1P56715 2156 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 BIRC2Q13490 618 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 RGS9BPQ6ZS82 235 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 ARL10Q8N8L6 244 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 OR2L8Q8NGY9 312 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 RAB3IL1Q8TBN0 382 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 AGR3Q8TD06 166 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 ZFPM2Q8WW38 1151 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 CNDP1Q96KN2 507 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 SGPP1Q9BX95 441 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 NOL11Q9H8H0 719 aaKnown RBP12.95□□□□□ -0.34
CLK4-210ENST00000522136 PARD6AQ9NPB6 346 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 DNAJC11Q9NVH1 559 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 SPHK1Q9NYA1 384 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 NCDNQ9UBB6 729 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 BTBD3Q9Y2F9 522 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 ANGPTL3Q9Y5C1 460 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 RNF215Q9Y6U7 377 aa12.95□□□□□ -0.34
CLK4-210ENST00000522136 ASCC3Q8N3C0 2202 aaKnown RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 OR6C74A6NCV1 312 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 TMEM114B3SHH9 223 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 BTN3A3O00478 584 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 OR7A17O14581 309 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 CDX4O14627 284 aaPredicted RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 PCDHGA12O60330 932 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 HSPA4LO95757 839 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 VIMP08670 466 aaKnown RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 NPPBP16860 134 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 TYRP1P17643 537 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 PEBP1P30086 187 aaKnown RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 SHMT2P34897 504 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 HSD17B2P37059 387 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 SH3BP2P78314 561 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 OCRLQ01968 901 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 RBBP7Q16576 425 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 THEMIS2Q5TEJ8 643 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 CAPN13Q6MZZ7 669 aaPredicted RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 LRRC70Q7Z2Q7 622 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 FAM20CQ8IXL6 584 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 KLHDC8AQ8IYD2 350 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 LRRC34Q8IZ02 419 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 ADGRF3Q8IZF5 1079 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 RAB42Q8N4Z0 105 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 OR52B6Q8NGF0 335 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 SMPDL3AQ92484 453 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 SH3KBP1Q96B97 665 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 APOLD1Q96LR9 279 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 ZNF317Q96PQ6 595 aaPredicted RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 CDK15Q96Q40 435 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 IPPKQ9H8X2 491 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 CCDC177Q9NQR7 707 aaPredicted RBP12.94□□□□□ -0.34
CLK4-210ENST00000522136 SEMA4GQ9NTN9 838 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 THAP1Q9NVV9 213 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 LRIT1Q9P2V4 623 aa12.94□□□□□ -0.34
CLK4-210ENST00000522136 LY6G6EA0A0G2JKS1 128 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms