RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 FBXW10Q5XX13 1052 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 ATG16L1Q676U5 607 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 TBC1D3GQ6DHY5 549 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 TBC1D3CQ6IPX1 549 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 TMEM220Q6QAJ8 160 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 SBSNQ6UWP8 590 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 FAM47EQ6ZV65 393 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 NLRC3Q7RTR2 1065 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 PIWIL4Q7Z3Z4 852 aaKnown RBP7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 TRIM69Q86WT6 500 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 HEATR4Q86WZ0 1026 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 PHYKPLQ8IUZ5 450 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 RASGRP3Q8IV61 690 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 VRK3Q8IV63 474 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 ZNF547Q8IVP9 402 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 TBC1D3Q8IZP1 549 aaPredicted RBP7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 CCDC197Q8NCU1 140 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 STAG3L4Q8TBR4 150 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 MOCOSQ96EN8 888 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 C7orf26Q96N11 449 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 SORT1Q99523 831 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 ELAC2Q9BQ52 826 aaKnown RBP7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 CCM2Q9BSQ5 444 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 TSSK1BQ9BXA7 367 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 PITPNM3Q9BZ71 974 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 NSRP1Q9H0G5 558 aaKnown RBP7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 OR2AG1Q9H205 316 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 TBC1D17Q9HA65 648 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 SLC40A1Q9NP59 571 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 ACSS2Q9NR19 701 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 THAP1Q9NVV9 213 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 MID2Q9UJV3 735 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 TMEM98Q9Y2Y6 226 aa7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 PCYT1BQ9Y5K3 369 aaPredicted RBP7.68□□□□□ -1.18
CTHRC1-203ENST00000520337 SPAG17Q6Q759 2223 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 SLC5A10A0PJK1 596 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 CCT8L1PA6NM43 557 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 TMEM114B3SHH9 223 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 F8W8V4 182 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 UBXN8O00124 270 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 EIF3FO00303 357 aaPredicted RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 BTN3A1O00481 513 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 KPNA5O15131 536 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 SLC31A1O15431 190 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 LATO43561 262 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 KIF1CO43896 1103 aaKnown RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 VEGFDO43915 354 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 NUAK1O60285 661 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 SNX3O60493 162 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 GPC4O75487 556 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 LYPLA1O75608 230 aaPredicted RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 IPO13O94829 963 aaKnown RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 CDK14O94921 469 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 FTH1P02794 183 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 FUCA1P04066 466 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 TPBGLP0DKB5 382 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 CBSLP0DN79 551 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 ACADMP11310 421 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 NEFHP12036 1026 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 MAT2AP31153 395 aaKnown RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 CBSP35520 551 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 IGFALSP35858 605 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 SLC1A6P48664 564 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 RGS4P49798 205 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 NAGLUP54802 743 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 PCBP3P57721 371 aaKnown RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 ABCE1P61221 599 aaKnown RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 NFKB2Q00653 900 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 PPP1R3AQ16821 1122 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 UNC50Q53HI1 259 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 PLEKHS1Q5SXH7 462 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 ANO7Q6IWH7 933 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 C11orf96Q7Z7L8 435 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 SLC22A9Q8IVM8 553 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 LSMEM2Q8N112 164 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 GBP7Q8N8V2 638 aaPredicted RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 PJA1Q8NG27 643 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 OR2T34Q8NGX1 318 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 CCT6BQ92526 530 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 DLG3Q92796 817 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 CCDC126Q96EE4 140 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 L3HYPDHQ96EM0 354 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 LINC00615Q96LM1 132 aaPredicted RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 ASB2Q96Q27 587 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 TMEM237Q96Q45 408 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 DRC3Q9H069 523 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 BTBD1Q9H0C5 482 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 EBF2Q9HAK2 575 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 SGK2Q9HBY8 427 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 MUTYHQ9UIF7 546 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 GPR160Q9UJ42 338 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 GPR34Q9UPC5 381 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 HEATR5BQ9P2D3 2071 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 SNRNP200O75643 2136 aaKnown RBP7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 PI4KAP42356 2102 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 SDK1Q7Z5N4 2213 aa7.67□□□□□ -1.18
CTHRC1-203ENST00000520337 LRRC14BA6NHZ5 514 aa7.66□□□□□ -1.18
CTHRC1-203ENST00000520337 LRRC72A6NJI9 287 aa7.66□□□□□ -1.18
CTHRC1-203ENST00000520337 GFYI3L273 518 aa7.66□□□□□ -1.18
CTHRC1-203ENST00000520337 QSOX1O00391 747 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms