RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SPTBN4Q9H254 2564 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 MN1Q10571 1320 aaPredicted RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 MDC1Q14676 2089 aaKnown RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 IGKV1-8A0A0C4DH67 115 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 CCDC189A1A4V9 331 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 DCDC2BA2VCK2 349 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 A8MT66 165 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 COPEO14579 308 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 PRPF4O43172 522 aaKnown RBP eCLIP9.55□□□□□ -0.88
CLN8-202ENST00000517514 KIF1CO43896 1103 aaKnown RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 NRP2O60462 931 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 RFPL3O75679 317 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 KCNK5O95279 499 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 SIX3O95343 332 aaPredicted RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 RPLP0P05388 317 aaKnown RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 RBP1P09455 135 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 FTH1P19P0C7X4 201 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 DHRS4L1P0CG22 281 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 CEACAM1P13688 526 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 UGT2B7P16662 529 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 RPA3P35244 121 aaPredicted RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 GDF5P43026 501 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 INSM1Q01101 510 aaPredicted RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 NAE1Q13564 534 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 PCLAFQ15004 111 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 PTCHD3Q3KNS1 767 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 AMZ1Q400G9 498 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 CDKL4Q5MAI5 379 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 CDCP2Q5VXM1 449 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 CES4AQ5XG92 561 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 FAM219BQ5XKK7 198 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 ANKS6Q68DC2 871 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 ATG14Q6ZNE5 492 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 RPS27LQ71UM5 84 aaKnown RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 B3GNT8Q7Z7M8 397 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 TRIM73Q86UV7 250 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 SLITRK4Q8IW52 837 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 OR2A1Q8NGT9 310 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 MAGEC3Q8TD91 643 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 UBTD2Q8WUN7 234 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 SCYL1Q96KG9 808 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 ATP6V1G3Q96LB4 118 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 PITPNM3Q9BZ71 974 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 RAB33BQ9H082 229 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 SEMA6CQ9H3T2 930 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 STN1Q9H668 368 aaKnown RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 SYNPO2LQ9H987 977 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 SSU72Q9NP77 194 aaKnown RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 HRASLS2Q9NWW9 162 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 ACTR10Q9NZ32 417 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 SENP1Q9P0U3 644 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 POMT2Q9UKY4 750 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 CDV3Q9UKY7 258 aaKnown RBP9.55□□□□□ -0.88
CLN8-202ENST00000517514 GRID1Q9ULK0 1009 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 WDFY3Q8IZQ1 3526 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 AKAP13Q12802 2813 aa9.55□□□□□ -0.88
CLN8-202ENST00000517514 PIPSLA2A3N6 862 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SUPT3HB4E1H0 165 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 D6RAR5 112 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 H3BQF6 201 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 CAPN5O15484 640 aaPredicted RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 ATP8B1O43520 1251 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 PRAMEF10O60809 474 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SUPT3HO75486 399 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 ANXA5P08758 320 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 NPPBP16860 134 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 AMD1P17707 334 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 MPSTP25325 297 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 OAS2P29728 719 aaKnown RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 PRDX3P30048 256 aaKnown RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 CCT5P48643 541 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 HSPA7P48741 367 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 NOVA1P51513 510 aaKnown RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 WDR4P57081 412 aaKnown RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 TBPL1P62380 186 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 GPLD1P80108 840 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 NFKB2Q00653 900 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 ZFP36L1Q07352 338 aaKnown RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 ILKQ13418 452 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SETDB1Q15047 1291 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 ZIC1Q15915 447 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 PFKFB4Q16877 469 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SULT1C3Q6IMI6 304 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 KLC3Q6P597 504 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 TTC23LQ6PF05 361 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 WDR74Q6RFH5 385 aaPredicted RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 DHRS13Q6UX07 377 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 ZYG11AQ6WRX3 759 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 FRA10AC1Q70Z53 315 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 PTGR2Q8N8N7 351 aaPredicted RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 OR10G6Q8NH81 332 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SMPDL3AQ92484 453 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 NCSTNQ92542 709 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 ALKBH8Q96BT7 664 aaKnown RBP9.54□□□□□ -0.88
CLN8-202ENST00000517514 FAM111AQ96PZ2 611 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SMC6Q96SB8 1091 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 RUFY1Q96T51 708 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 RAB11FIP5Q9BXF6 653 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms