RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CCM2LQ9NUG4 571 aaPredicted RBP10.01□□□□□ -0.81
CLDND1-231ENST00000515620 ZNF282Q9UDV7 671 aaPredicted RBP10.01□□□□□ -0.81
CLDND1-231ENST00000515620 NPIPA1Q9UND3 350 aa10.01□□□□□ -0.81
CLDND1-231ENST00000515620 CPAMD8Q8IZJ3 1885 aa10.01□□□□□ -0.81
CLDND1-231ENST00000515620 FLNAP21333 2647 aaKnown RBP10.01□□□□□ -0.81
CLDND1-231ENST00000515620 IGHV1-45A0A0A0MS14 117 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 C2orf81A6NN90 581 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 E9PLN8 166 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 PROSCO94903 275 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 MED26O95402 600 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 MLYCDO95822 493 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 IGFBP2P18065 325 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 CXCR2P25025 360 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 VSX2P58304 361 aaPredicted RBP10□□□□□ -0.81
CLDND1-231ENST00000515620 DYNLT1P63172 113 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 XIAPP98170 497 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 HSF1Q00613 529 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 MYL5Q02045 173 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 ALDH6A1Q02252 535 aaKnown RBP10□□□□□ -0.81
CLDND1-231ENST00000515620 LTBQ06643 244 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 CEBPEQ15744 281 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 KRTCAP3Q53RY4 240 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 TCTE1Q5JU00 501 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 RIPOR1Q6ZS17 1223 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 LAPTM4BQ86VI4 370 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 TAX1BP1Q86VP1 789 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 AMER2Q8N7J2 671 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 DMRTA2Q96SC8 542 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 VKORC1Q9BQB6 163 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 SELENOSQ9BQE4 189 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 ZNF304Q9HCX3 659 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
CLDND1-231ENST00000515620 DLL4Q9NR61 685 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 KLHL1Q9NR64 748 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 RIC8BQ9NVN3 520 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 COQ3Q9NZJ6 369 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 IL1RAPL1Q9NZN1 696 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 POLG2Q9UHN1 485 aa10□□□□□ -0.81
CLDND1-231ENST00000515620 MAP1AP78559 2803 aaPredicted RBP10□□□□□ -0.81
CLDND1-231ENST00000515620 SNRNP200O75643 2136 aaKnown RBP10□□□□□ -0.81
CLDND1-231ENST00000515620 ZNF469Q96JG9 3925 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 NKX2-6A6NCS4 301 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 LRRC10BA6NIK2 292 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 FAM90A27PA6NNH2 459 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 AGAP14A8MT82 685 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 FOXO6A8MYZ6 492 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 IDSB3KWA1 339 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 CCL22O00626 93 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 ADAM10O14672 748 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 FFAR3O14843 346 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 GPR42O15529 346 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 TTI1O43156 1089 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 TSPAN12O95859 305 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 AGTP01019 485 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 ITGALP20701 1170 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 FBLP22087 321 aaKnown RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 PKLRP30613 574 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 EMP2P54851 167 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 FOLH1Q04609 750 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 WASHC5Q12768 1159 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 OLIG2Q13516 323 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 BRD3Q15059 726 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 TAF1AQ15573 450 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 ZC3H12BQ5HYM0 836 aaKnown RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 MICALCLQ6ZW33 695 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 Q71RC1 249 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 DOLPP1Q86YN1 238 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 RFX6Q8HWS3 928 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 TBC1D21Q8IYX1 336 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 TAB3Q8N5C8 712 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 C2orf73Q8N5S3 287 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 CLDN19Q8N6F1 224 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 LMNTD1Q8N9Z9 388 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 OR13C4Q8NGS5 318 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 OR5K2Q8NHB8 316 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 HEXDCQ8WVB3 486 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 NANOS1Q8WY41 292 aaKnown RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 FICDQ9BVA6 458 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 MAK16Q9BXY0 300 aaKnown RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 HES7Q9BYE0 225 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 ZDHHC3Q9NYG2 299 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 STMN3Q9NZ72 180 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 KLHL8Q9P2G9 620 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 RPH3AQ9Y2J0 694 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 LUC7L2Q9Y383 392 aaKnown RBP9.99□□□□□ -0.81
CLDND1-231ENST00000515620 ABCA4P78363 2273 aa9.99□□□□□ -0.81
CLDND1-231ENST00000515620 IGLV3-16A0A075B6K0 115 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 A0A1W2PQ72 361 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 HYKKA2RU49 373 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 FITM1A5D6W6 292 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 C3orf70A6NLC5 250 aaPredicted RBP9.98□□□□□ -0.81
CLDND1-231ENST00000515620 ZNF487B1APH4 448 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 KDM1AO60341 852 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 ZRANB2O95218 330 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLDND1-231ENST00000515620 ZWINTO95229 277 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 AP2A1O95782 977 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 ACADLP28330 430 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 CDKN1CP49918 316 aaPredicted RBP9.98□□□□□ -0.81
CLDND1-231ENST00000515620 MYBPHQ13203 477 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms