RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 INTS10Q9NVR2 710 aaKnown RBP10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 IL1RAPL1Q9NZN1 696 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 SPATA7Q9P0W8 599 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 DHCR7Q9UBM7 475 aaKnown RBP10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 SLC39A10Q9ULF5 831 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 SPTA1P02549 2419 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 A0A1B0GX78 115 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 A0A1W2PPV9 198 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 MAGEB16A2A368 324 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 SDR42E2A6NKP2 422 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 GOLGA8MH3BSY2 632 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 CES2O00748 559 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 CNOT3O75175 753 aaKnown RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 ERGP11308 486 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 PKMP14618 531 aaKnown RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 PSMB5P28074 263 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 CLCN7P51798 805 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 PGDP52209 483 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 DHX34Q14147 1143 aaKnown RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 SF1Q15637 639 aaKnown RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 CYP2A13Q16696 494 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 COLEC12Q5KU26 742 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 ZNF470Q6ECI4 717 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 NEPROQ6NW34 567 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 FIGLAQ6QHK4 219 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 MED25Q71SY5 747 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 MRGPREQ86SM8 312 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 MCATQ8IVS2 390 aaKnown RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 RAB42Q8N4Z0 105 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 NAT8LQ8N9F0 302 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 TMEM102Q8N9M5 508 aaPredicted RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 TEX19Q8NA77 164 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 OR2Y1Q8NGV0 311 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 GIMAP7Q8NHV1 300 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 MAGEC3Q8TD91 643 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 SKA2Q8WVK7 121 aaPredicted RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 MIB2Q96AX9 1013 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 FAM136AQ96C01 138 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 NDC1Q9BTX1 674 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 SLC25A23Q9BV35 468 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 KCNF1Q9H3M0 494 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 TXLNGQ9NUQ3 528 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 IRAK4Q9NWZ3 460 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 IFT80Q9P2H3 777 aaPredicted RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 GALPQ9UBC7 116 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 NDOR1Q9UHB4 597 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 GPN3Q9UHW5 284 aaPredicted RBP10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 SNX12Q9UMY4 172 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 CRYL1Q9Y2S2 319 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 MED16Q9Y2X0 877 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 PCDHGB7Q9Y5F8 929 aa10.04□□□□□ -0.8
HMGXB3-205ENST00000514469 GOLGA6L10A0A0M3HER8 536 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 FITM1A5D6W6 292 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 ARHGEF33A8MVX0 844 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 TARM1B6A8C7 271 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 E5RI56 91 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 MYO1CO00159 1063 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 KIF5CO60282 957 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 CTSVO60911 334 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 PSIP1O75475 530 aaKnown RBP10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 USP1O94782 785 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 ONECUT2O95948 504 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 UMODP07911 640 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 F7P08709 466 aaPredicted RBP10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 CD63P08962 238 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 CHRM3P20309 590 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 FOLR3P41439 243 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 GRIA3P42263 894 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 SLC1A2P43004 574 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 CD97P48960 835 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 CCL11P51671 97 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 ARSFP54793 590 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 RRADP55042 308 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 SLC9A5Q14940 896 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 IGFBP7Q16270 282 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 NKAIN1Q4KMZ8 207 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 ACSBG2Q5FVE4 666 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 ZC3H12BQ5HYM0 836 aaKnown RBP10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 TCTE1Q5JU00 501 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 YOD1Q5VVQ6 348 aaPredicted RBP10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 MLIPQ5VWP3 458 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 RNF44Q7L0R7 432 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 DENND6AQ8IWF6 608 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 LMNTD2Q8IXW0 634 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 PPIL6Q8IXY8 311 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 OR2L3Q8NG85 312 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 OR2A1Q8NGT9 310 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 GRK7Q8WTQ7 553 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 KCNJ9Q92806 393 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 ZUFSPQ96AP4 578 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 FKBP10Q96AY3 582 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 IP6K3Q96PC2 410 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 SLC30A3Q99726 388 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 MIPEPQ99797 713 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 SELENOSQ9BQE4 189 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 NUDT9Q9BW91 350 aa10.03□□□□□ -0.8
HMGXB3-205ENST00000514469 GRPEL1Q9HAV7 217 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms