RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CCNHP51946 323 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 GEMIN4P57678 1058 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 KIAA1024LP59773 190 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 SNRPD1P62314 119 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 YWHAZP63104 245 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 RAD51Q06609 339 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 ELP6Q0PNE2 266 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 BIRC2Q13490 618 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 MTM1Q13496 603 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF630Q2M218 657 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 KLHL40Q2TBA0 621 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 PGS1Q32NB8 556 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 GFOD2Q3B7J2 385 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 KRTAP27-1Q3LI81 207 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 TMEM52BQ4KMG9 183 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 ATP1A1-AS1Q5TC04 95 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 KRT39Q6A163 491 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 PMF1Q6P1K2 205 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 C22orf39Q6P5X5 142 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 PARS2Q7L3T8 475 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 SYVN1Q86TM6 617 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 VPS36Q86VN1 386 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 FITM2Q8N6M3 262 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 DCAF4L2Q8NA75 395 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 OR56A4Q8NGH8 313 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 TAS1R2Q8TE23 839 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 CXorf40AQ8TE69 158 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 C19orf60Q96EN9 201 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 C1GALT1C1Q96EU7 318 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 MVB12AQ96EY5 273 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 C14orf79Q96F83 325 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 C1orf74Q96LT6 269 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 RPRD1AQ96P16 312 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 GSDMCQ9BYG8 508 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 ING2Q9H160 280 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 POPDC2Q9HBU9 364 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 APOBEC3GQ9HC16 384 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 SPATS2LQ9NUQ6 558 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 ASF1BQ9NVP2 202 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 FBXO34Q9NWN3 711 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 COPG2Q9UBF2 871 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 VPS51Q9UID3 782 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 MFHAS1Q9Y4C4 1052 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 COPG1Q9Y678 874 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 PKDREJQ9NTG1 2253 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 MAP1AP78559 2803 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 TMEM202A6NGA9 273 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RNF103O00237 685 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 O00370 1275 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 PPM1DO15297 605 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 GRID2O43424 1007 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 STX10O60499 249 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 ZMPSTE24O75844 475 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 DNAJB5O75953 348 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 GSRP00390 522 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RHOCP08134 193 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 STSP08842 583 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 ANKRD34CP0C6C1 535 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 FGF5P12034 268 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 COX6B1P14854 86 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RRM1P23921 792 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 MMP13P45452 471 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC6A9P48067 706 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 VAMP7P51809 220 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 LINC00205P59089 165 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RPS7P62081 194 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RPS15P62841 145 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 FOXM1Q08050 763 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 ILF3Q12906 894 aaKnown RBP eCLIP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 DNASE1L3Q13609 305 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 GRM3Q14832 879 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 MLC1Q15049 377 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 POLD3Q15054 466 aaPredicted RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 MEA1Q16626 185 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 NFIL3Q16649 462 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 GOLGA7BQ2TAP0 167 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 WSCD2Q2TBF2 565 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 MYLK3Q32MK0 819 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 VWA2Q5GFL6 755 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 C1orf220Q5T0J3 134 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 SYPL2Q5VXT5 272 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 MTFR2Q6P444 385 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 LRRC31Q6UY01 552 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 UNC13DQ70J99 1090 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 KCNMB4Q86W47 210 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 FAM186BQ8IYM0 893 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RBMXL3Q8N7X1 1067 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 GLIS1Q8NBF1 620 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 FBXL13Q8NEE6 735 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 OR2AP1Q8NGE2 309 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 OR52K2Q8NGK3 314 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 OR10G6Q8NH81 332 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 UBA3Q8TBC4 463 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 UBE2Q2Q8WVN8 375 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 SH3KBP1Q96B97 665 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RANBP9Q96S59 729 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 PSMB7Q99436 277 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 QTRT1Q9BXR0 403 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 PANK2Q9BZ23 570 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms