RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 POLLQ9UGP5 575 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 TCFL5Q9UL49 500 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC12A4Q9UP95 1085 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 NCKAP1Q9Y2A7 1128 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 WBP11Q9Y2W2 641 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 LTN1O94822 1766 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ARHGEF10O15013 1369 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 PPP6CO00743 305 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 NRP1O14786 923 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 MAGEB2O15479 319 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 BUD23O43709 281 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 VPS26AO75436 327 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 SUN1O94901 812 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 BRI3O95415 125 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 CXCL10P02778 98 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ANKRD34CP0C6C1 535 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ACO1P21399 889 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 PTPN7P35236 360 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 MC3RP41968 323 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 GNAQP50148 359 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 MERTKQ12866 999 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 RCAN2Q14206 197 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 SF3B4Q15427 424 aaKnown RBP eCLIP6.1□□□□□ -1.432e-7■■■■■ 32.9
TRAPPC11-209ENST00000512476 FAM189A2Q15884 450 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC18A3Q16572 532 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 SMN1Q16637 294 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 PCK2Q16822 640 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZC2HC1CQ53FD0 456 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 DCAF6Q58WW2 860 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 NDUFAF5Q5TEU4 345 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 GPR180Q86V85 440 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 COMMD1Q8N668 190 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 DNERQ8NFT8 737 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 NSMCE1Q8WV22 266 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 RIT1Q92963 219 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 APOLD1Q96LR9 279 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 TSNARE1Q96NA8 513 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZNF317Q96PQ6 595 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 EFHD1Q9BUP0 239 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 PPIL3Q9H2H8 161 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 GBA2Q9HCG7 927 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 THEGQ9P2T0 379 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 MYOTQ9UBF9 498 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 DYRK1BQ9Y463 629 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 ATG4BQ9Y4P1 393 aa6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 BZW2Q9Y6E2 419 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-209ENST00000512476 TNS3Q68CZ2 1445 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 TMEM82A0PJX8 343 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 NPIPB5A8MRT5 1133 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 MAGEB17A8MXT2 336 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 PRR23D1E9PI22 279 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 NR5A2O00482 541 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 SERPINI2O75830 405 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 CBX7O95931 251 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 GCP02774 474 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 CSF1RP07333 972 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 GNAI3P08754 354 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 PRR23D2P0DMB1 279 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZNF8P17098 575 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 FSTP19883 344 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 G0S2P27469 103 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 MTNR1AP48039 350 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 ATP5J2P56134 94 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 EEFSECP57772 596 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 YWHAEP62258 255 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 GNAI1P63096 354 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 MAB21L1Q13394 359 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 MED1Q15648 1581 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 UGT3A2Q3SY77 523 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 TMEM31Q5JXX7 168 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 TMEM220Q6QAJ8 160 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 COPS6Q7L5N1 327 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 ECHDC2Q86YB7 292 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 TIGD4Q8IY51 512 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 CCNYL1Q8N7R7 359 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 C12orf50Q8NA57 414 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 ANKLE1Q8NAG6 615 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 OR7D4Q8NG98 312 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 SNRNP40Q96DI7 357 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 TKTL2Q9H0I9 626 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 C11orf54Q9H0W9 315 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 SYNPO2LQ9H987 977 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLCO1C1Q9NYB5 712 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 HACD3Q9P035 362 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 WASF3Q9UPY6 502 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 MRPS7Q9Y2R9 242 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 SOS2Q07890 1332 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 BECN2A8MW95 431 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 H7C1Q1 480 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 KIAA0391O15091 583 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 CTIFO43310 598 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 HSMCR30P0CW71 290 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 MLNP12872 115 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 NQO2P16083 231 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 CFL1P23528 166 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC6A2P23975 617 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC1A3P43003 542 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 CASP4P49662 377 aa6.09□□□□□ -1.43
TRAPPC11-209ENST00000512476 RIPK4P57078 832 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms