RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SLC25A17O43808 307 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 FGF19O95750 216 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 GNSP15586 552 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 GABRG2P18507 467 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 MYF6P23409 242 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 GLRA2P23416 452 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 PNPLA4P41247 253 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 QARSP47897 775 aaKnown RBP6.29□□□□□ -1.4
USP53-206ENST00000510737 NLRP5P59047 1200 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 GPR17Q13304 367 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 PLD1Q13393 1074 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 CALCRLQ16602 461 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 ATAD1Q8NBU5 361 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 NFKBIZQ9BYH8 718 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 CTDSP1Q9GZU7 261 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 GLT8D2Q9H1C3 349 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 NLRC4Q9NPP4 1024 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 SCRT2Q9NQ03 307 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 DUS2Q9NX74 493 aaKnown RBP6.29□□□□□ -1.4
USP53-206ENST00000510737 KIAA1549LQ6ZVL6 1849 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 GOLGA4Q13439 2230 aaKnown RBP6.29□□□□□ -1.4
USP53-206ENST00000510737 CREBBPQ92793 2442 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 ESYT2A0FGR8 921 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 hDV102S1A0JD36 115 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 CCDC69A6NI79 296 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 SH2B2O14492 632 aaPredicted RBP6.28□□□□□ -1.4
USP53-206ENST00000510737 SKAP2O75563 359 aaPredicted RBP6.28□□□□□ -1.4
USP53-206ENST00000510737 METTL18O95568 372 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 LDLRP01130 860 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 IL1AP01583 271 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 EDN1P05305 212 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 NMT1P30419 496 aaKnown RBP6.28□□□□□ -1.4
USP53-206ENST00000510737 YWHABP31946 246 aaKnown RBP6.28□□□□□ -1.4
USP53-206ENST00000510737 TTKP33981 857 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 ACTN2P35609 894 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 MATKP42679 507 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 BFSP1Q12934 665 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 TFDP1Q14186 410 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 MTF1Q14872 753 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 XKR4Q5GH76 650 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 EOGTQ5NDL2 527 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 TXNDC8Q6A555 127 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 NAPEPLDQ6IQ20 393 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 ZNF280DQ6N043 979 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 ALKAL1Q6UXT8 129 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 EFCAB13Q8IY85 973 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 TMTC2Q8N394 836 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 LRRC15Q8TF66 581 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 KTI12Q96EK9 354 aaPredicted RBP6.28□□□□□ -1.4
USP53-206ENST00000510737 ZMAT2Q96NC0 199 aaKnown RBP6.28□□□□□ -1.4
USP53-206ENST00000510737 CYP2S1Q96SQ9 504 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 LGMNQ99538 433 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 WDR12Q9GZL7 423 aaKnown RBP6.28□□□□□ -1.4
USP53-206ENST00000510737 NOX4Q9NPH5 578 aa6.28□□□□□ -1.4
USP53-206ENST00000510737 MTMR11A4FU01 709 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 E7EVH7 732 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 PRC1O43663 620 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 ATF6P18850 670 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 ANOS1P23352 680 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 SERPINB3P29508 390 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 CDC25CP30307 473 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 LIFRP42702 1097 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 CENPAP49450 140 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 UCNP55089 124 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 ZNF77Q15935 545 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 LINC00303Q3SY05 128 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 SYCP2LQ5T4T6 812 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 PGBD2Q6P3X8 592 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 GDPD4Q6W3E5 623 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 ITIH5Q86UX2 942 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 SATL1Q86VE3 508 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 DENND6AQ8IWF6 608 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 C4orf19Q8IY42 314 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 ZNF248Q8NDW4 579 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 APPL2Q8NEU8 664 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 C18orf25Q96B23 403 aaPredicted RBP6.27□□□□□ -1.41
USP53-206ENST00000510737 SLC22A12Q96S37 553 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 ZMYND12Q9H0C1 365 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 KIF9Q9HAQ2 790 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 DIAPH3Q9NSV4 1193 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 STARD5Q9NSY2 213 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 ZNF711Q9Y462 761 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 USP9YO00507 2555 aaPredicted RBP6.27□□□□□ -1.41
USP53-206ENST00000510737 LRBAP50851 2863 aa6.27□□□□□ -1.41
USP53-206ENST00000510737 MYO16Q9Y6X6 1858 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 A0A1W2PQF6 199 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 ZNF587BE7ETH6 402 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 P2RY10O00398 339 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 KLK10O43240 276 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 TDP2O95551 362 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 CRYAAP02489 173 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 HMGA1P17096 107 aaKnown RBP6.26□□□□□ -1.41
USP53-206ENST00000510737 MARCKSP29966 332 aaPredicted RBP6.26□□□□□ -1.41
USP53-206ENST00000510737 RPL9P32969 192 aaKnown RBP6.26□□□□□ -1.41
USP53-206ENST00000510737 HNF1BP35680 557 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 IFNAR2P48551 515 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 PRKAA2P54646 552 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 YWHAHQ04917 246 aaPredicted RBP6.26□□□□□ -1.41
USP53-206ENST00000510737 DNAJC3Q13217 504 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 WDR45BQ5MNZ6 344 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms