RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 KLRC2P26717 231 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 PBLDP30039 288 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 DGKGP49619 791 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 DUOXA1Q1HG43 343 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 CELF3Q5SZQ8 465 aaKnown RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 SLC22A17Q8WUG5 538 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 BRD9Q9H8M2 597 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 MEPEQ9NQ76 525 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 DOPEY2Q9Y3R5 2298 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 CLTCQ00610 1675 aaKnown RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 HSPA12AO43301 675 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 CNTN5O94779 1100 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ADRB2P07550 413 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 RPS2P15880 293 aaKnown RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 ZNF14P17017 642 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 SPAM1P38567 509 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 METAP1DQ6UB28 335 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 VMP1Q96GC9 406 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 AP1S3Q96PC3 154 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 MAGEH1Q9H213 219 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 POPDC3Q9HBV1 291 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ABCB9Q9NP78 766 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 PHRF1Q9P1Y6 1649 aaKnown RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 EPHB6O15197 1021 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 IFNA2P01563 188 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 IFNA17P01571 189 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 SPARCP09486 303 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 BMP1P13497 986 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 CHMP24386 653 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 SHMT1P34896 483 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 FCGRTP55899 365 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 CHRDL2Q6WN34 429 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 GHDCQ8N2G8 530 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 TERB2Q8NHR7 220 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 CCDC86Q9H6F5 360 aaKnown RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 TAS2R9Q9NYW1 312 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 HLA-EP13747 358 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 E2F1Q01094 437 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 SLC3A1Q07837 685 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ABHD18Q0P651 414 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 KCNS3Q9BQ31 491 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 KXD1Q9BQD3 176 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 SCN4AP35499 1836 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 UBXN7O94888 489 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 VSIG10LQ86VR7 867 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 PSD4Q8NDX1 1056 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 CHAC2Q8WUX2 184 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 HCN2Q9UL51 889 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 FARSAQ9Y285 508 aaKnown RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 CD83Q01151 205 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 VANGL1Q8TAA9 524 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 RADILQ96JH8 1075 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 COL20A1Q9P218 1284 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 TPPPO94811 219 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 RENP00797 406 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 RFWD3Q6PCD5 774 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 IDO2Q6ZQW0 420 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ZC3HC1Q86WB0 502 aaKnown RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 SGCDQ92629 289 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ZNF668Q96K58 619 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 SLC2A11Q9BYW1 496 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 SPATC1LQ9H0A9 340 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 DCDC2CA8MYV0 355 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 TLR4O00206 839 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 GABBR2O75899 941 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ALDH2P05091 517 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 SOX9P48436 509 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 PSEN2P49810 448 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 PIGGQ5H8A4 983 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ATG9BQ674R7 924 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 OR56A1Q8NGH5 318 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 WDR55Q9H6Y2 383 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 KIAA1522Q9P206 1035 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 NKX1-2Q9UD57 310 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 UBIAD1Q9Y5Z9 338 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 RECQL4O94761 1208 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 CYB5AP00167 134 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 HTR1BP28222 390 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 OR10H5Q8NGA6 315 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 JPH3Q8WXH2 748 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 ABHD16BQ9H3Z7 469 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 IPPKQ9H8X2 491 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 SPTA1P02549 2419 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 VTNP04004 478 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 GOT1P17174 413 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ZNF169Q14929 603 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 FBXL19Q6PCT2 694 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 RALGPS2Q86X27 583 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 OMDQ99983 421 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ANKRD60Q9BZ19 345 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 PAK1IP1Q9NWT1 392 aaPredicted RBP8.2□□□□□ -1.1
HTT-208ENST00000510626 MOCS1Q9NZB8 636 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 ABCD2Q9UBJ2 740 aa8.2□□□□□ -1.1
HTT-208ENST00000510626 SULT1C2O00338 296 aa8.19□□□□□ -1.1
HTT-208ENST00000510626 C22orf31O95567 290 aa8.19□□□□□ -1.1
HTT-208ENST00000510626 IKBKEQ14164 716 aa8.19□□□□□ -1.1
HTT-208ENST00000510626 OR10H4Q8NGA5 316 aa8.19□□□□□ -1.1
HTT-208ENST00000510626 SLC7A13Q8TCU3 470 aa8.19□□□□□ -1.1
HTT-208ENST00000510626 FCAMRQ8WWV6 532 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms