RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GBP5Q96PP8 586 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 C17orf62Q9BQA9 187 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 DHRS4Q9BTZ2 278 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 TXLNGQ9NUQ3 528 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 GALPQ9UBC7 116 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 DHCR7Q9UBM7 475 aaKnown RBP22.09■■□□□ 1.13
SNF8-209ENST00000510558 PADI2Q9Y2J8 665 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 MYO18BQ8IUG5 2567 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 PCM1Q15154 2024 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 E5RI56 91 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 FCRL6Q6DN72 434 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 FIGLAQ6QHK4 219 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 ASB18Q6ZVZ8 466 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 MCATQ8IVS2 390 aaKnown RBP22.08■■□□□ 1.13
SNF8-209ENST00000510558 AGGF1Q8N302 714 aaeCLIP22.08■■□□□ 1.13
SNF8-209ENST00000510558 ZBTB2Q8N680 514 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 MAGEC3Q8TD91 643 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 DENND1AQ8TEH3 1009 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 ING2Q9H160 280 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 ACSS2Q9NR19 701 aa22.08■■□□□ 1.13
SNF8-209ENST00000510558 CTAGE9A4FU28 777 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 USP1O94782 785 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 FKBP9O95302 570 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 MATN4O95460 622 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 F7P08709 466 aaPredicted RBP22.07■■□□□ 1.12
SNF8-209ENST00000510558 PSMB5P28074 263 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 DCDP81605 110 aaKnown RBP22.07■■□□□ 1.12
SNF8-209ENST00000510558 KLRB1Q12918 225 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 PPP1R7Q15435 360 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 ACSBG2Q5FVE4 666 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 MLIPQ5VWP3 458 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 DENND6AQ8IWF6 608 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 PPIL6Q8IXY8 311 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 HMGCLL1Q8TB92 370 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 SIGLEC10Q96LC7 697 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 NDC1Q9BTX1 674 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 SPATA7Q9P0W8 599 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 GPN3Q9UHW5 284 aaPredicted RBP22.07■■□□□ 1.12
SNF8-209ENST00000510558 MAD1L1Q9Y6D9 718 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 ANKRD12Q6UB98 2062 aa22.07■■□□□ 1.12
SNF8-209ENST00000510558 PDGFAP04085 211 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 ATXN8OSP0DMR3 200 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 GRIA3P42263 894 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 CCL11P51671 97 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 CTBP1Q13363 440 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 LONRF1Q17RB8 773 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 KLHL38Q2WGJ6 581 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 ZC3H12BQ5HYM0 836 aaKnown RBP22.06■■□□□ 1.12
SNF8-209ENST00000510558 COLEC12Q5KU26 742 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 FBXO6Q9NRD1 293 aaPredicted RBP22.06■■□□□ 1.12
SNF8-209ENST00000510558 IFT80Q9P2H3 777 aaPredicted RBP22.06■■□□□ 1.12
SNF8-209ENST00000510558 PCSK5Q92824 1860 aa22.06■■□□□ 1.12
SNF8-209ENST00000510558 A0A1W2PPV9 198 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 ARHGEF33A8MVX0 844 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 KLF7O75840 302 aaPredicted RBP22.05■■□□□ 1.12
SNF8-209ENST00000510558 SLC1A2P43004 574 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 CLCN7P51798 805 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 SLC9A5Q14940 896 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 NKAIN1Q4KMZ8 207 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 RNASEH2BQ5TBB1 312 aaKnown RBP22.05■■□□□ 1.12
SNF8-209ENST00000510558 RAB43Q86YS6 212 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 TEX19Q8NA77 164 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 DLG3Q92796 817 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 ZUFSPQ96AP4 578 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 MIPEPQ99797 713 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 SLC25A23Q9BV35 468 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 DDX47Q9H0S4 455 aaKnown RBP22.05■■□□□ 1.12
SNF8-209ENST00000510558 CCDC68Q9H2F9 335 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 C20orf96Q9NUD7 363 aaPredicted RBP22.05■■□□□ 1.12
SNF8-209ENST00000510558 NDOR1Q9UHB4 597 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 ASIC3Q9UHC3 531 aa22.05■■□□□ 1.12
SNF8-209ENST00000510558 PCDHGA9Q9Y5G4 932 aaKnown RBP22.05■■□□□ 1.12
SNF8-209ENST00000510558 TARM1B6A8C7 271 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 PSIP1O75475 530 aaKnown RBP22.04■■□□□ 1.12
SNF8-209ENST00000510558 TCP1P17987 556 aaKnown RBP22.04■■□□□ 1.12
SNF8-209ENST00000510558 GCGRP47871 477 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 ATP1A4Q13733 1029 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 FASTKQ14296 549 aaKnown RBP22.04■■□□□ 1.12
SNF8-209ENST00000510558 CYP2A13Q16696 494 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 TTLL9Q3SXZ7 439 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.04■■□□□ 1.12
SNF8-209ENST00000510558 LMNTD2Q8IXW0 634 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 OR2L3Q8NG85 312 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 OR9A1PQ8NGU1 263 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 CALML6Q8TD86 181 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 SLC30A3Q99726 388 aa22.04■■□□□ 1.12
SNF8-209ENST00000510558 PTRH2Q9Y3E5 179 aaKnown RBP22.04■■□□□ 1.12
SNF8-209ENST00000510558 CATP04040 527 aaKnown RBP22.03■■□□□ 1.12
SNF8-209ENST00000510558 CD63P08962 238 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 ERGP11308 486 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 ALAS2P22557 587 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 OTX2P32243 289 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 FOLR3P41439 243 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 PGDP52209 483 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 ARSFP54793 590 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 ZNF549Q6P9A3 640 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 TTLL10Q6ZVT0 673 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 MED25Q71SY5 747 aa22.03■■□□□ 1.12
SNF8-209ENST00000510558 TMEM102Q8N9M5 508 aaPredicted RBP22.03■■□□□ 1.12
SNF8-209ENST00000510558 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms