RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 MAGP20916 626 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 PSMB5P28074 263 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 PPARGP37231 505 aaPredicted RBP10.49□□□□□ -0.73
RNF4-212ENST00000509258 EIF3BP55884 814 aaKnown RBP10.49□□□□□ -0.73
RNF4-212ENST00000509258 MRPL49Q13405 166 aaKnown RBP10.49□□□□□ -0.73
RNF4-212ENST00000509258 ATP1A4Q13733 1029 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 SLC9A5Q14940 896 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 TPSAB1Q15661 275 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 VWA5B1Q5TIE3 1220 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 LYPLAL1Q5VWZ2 237 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 FCRL6Q6DN72 434 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 NLRP9Q7RTR0 991 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 REXO1L1PQ8IX06 675 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 IQCKQ8N0W5 287 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 RASGEF1CQ8N431 466 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 PROKR1Q8TCW9 393 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 COG1Q8WTW3 980 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 TM9SF4Q92544 642 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 PEX13Q92968 403 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 TCTN2Q96GX1 697 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 GBP5Q96PP8 586 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 SMAD5Q99717 465 aaKnown RBP10.49□□□□□ -0.73
RNF4-212ENST00000509258 SLC30A3Q99726 388 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 KIFC1Q9BW19 673 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 TSSK1BQ9BXA7 367 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 KCNF1Q9H3M0 494 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 SLC22A11Q9NSA0 550 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 TXLNGQ9NUQ3 528 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 IRAK4Q9NWZ3 460 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 C5AR2Q9P296 337 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 NDOR1Q9UHB4 597 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 POLG2Q9UHN1 485 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 SOX13Q9UN79 622 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 ZKSCAN5Q9Y2L8 839 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 CREBBPQ92793 2442 aa10.49□□□□□ -0.73
RNF4-212ENST00000509258 A0A1W2PPV9 198 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 A1L4Q6 167 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 A6NL46 340 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 GOLGA6L6A8MZA4 724 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 KLF7O75840 302 aaPredicted RBP10.48□□□□□ -0.73
RNF4-212ENST00000509258 RNF224P0DH78 156 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 RPS3P23396 243 aaKnown RBP eCLIP10.48□□□□□ -0.73
RNF4-212ENST00000509258 MCM3P25205 808 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 FMO4P31512 558 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 GRIA3P42263 894 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 MAGEA6P43360 314 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 NPY2RP49146 381 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 RAB28P51157 221 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 GPS1Q13098 491 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 FASTKQ14296 549 aaKnown RBP10.48□□□□□ -0.73
RNF4-212ENST00000509258 GBX1Q14549 363 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 SSPNQ14714 243 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 SLC5A12Q1EHB4 618 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 TYSND1Q2T9J0 566 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 DNAJC21Q5F1R6 531 aaKnown RBP10.48□□□□□ -0.73
RNF4-212ENST00000509258 LRRC8BQ6P9F7 803 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 CENPUQ71F23 418 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 GSTA5Q7RTV2 222 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 MRGPREQ86SM8 312 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 ZNF655Q8N720 491 aaPredicted RBP10.48□□□□□ -0.73
RNF4-212ENST00000509258 RBMXL3Q8N7X1 1067 aaKnown RBP10.48□□□□□ -0.73
RNF4-212ENST00000509258 CLEC1AQ8NC01 280 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 TRIM58Q8NG06 486 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.48□□□□□ -0.73
RNF4-212ENST00000509258 VPS50Q96JG6 964 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 IL22Q9GZX6 179 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 MRM3Q9HC36 420 aaKnown RBP10.48□□□□□ -0.73
RNF4-212ENST00000509258 OR6C2Q9NZP2 312 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 MED16Q9Y2X0 877 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 SVILO95425 2214 aa10.48□□□□□ -0.73
RNF4-212ENST00000509258 ITPR2Q14571 2701 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.47□□□□□ -0.73
RNF4-212ENST00000509258 GOLGA8MH3BSY2 632 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 RASGRF2O14827 1237 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 CTSVO60911 334 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 OR2B3O76000 313 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 C1orf105O95561 183 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 KRT14P02533 472 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 RPN2P04844 631 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 APOA4P06727 396 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 PIM1P11309 404 aaPredicted RBP10.47□□□□□ -0.73
RNF4-212ENST00000509258 CD9P21926 228 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 OTX2P32243 289 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 FOLR3P41439 243 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 TTPAP49638 278 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 RAPSNQ13702 412 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 EIF2S3LQ2VIR3 472 aaKnown RBP10.47□□□□□ -0.73
RNF4-212ENST00000509258 ACSBG2Q5FVE4 666 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.47□□□□□ -0.73
RNF4-212ENST00000509258 MLIPQ5VWP3 458 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 PTRHD1Q6GMV3 140 aaKnown RBP10.47□□□□□ -0.73
RNF4-212ENST00000509258 TLDC1Q6P9B6 456 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 CNSTQ6PJW8 725 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 UNC5DQ6UXZ4 953 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 MAMDC2Q7Z304 686 aaPredicted RBP10.47□□□□□ -0.73
RNF4-212ENST00000509258 DCUN1D3Q8IWE4 304 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 DENND6AQ8IWF6 608 aa10.47□□□□□ -0.73
RNF4-212ENST00000509258 SLC35F6Q8N357 371 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms