RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 PAICSP22234 425 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 PAX6P26367 422 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SDHAP31040 664 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 CRATP43155 626 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 CRKLP46109 303 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 CCR9P51686 369 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 EPHA4P54764 986 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 RPL6Q02878 288 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 CYP24A1Q07973 514 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 HNF4GQ14541 408 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 INPP5AQ14642 412 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 POU4F3Q15319 338 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SEC23BQ15437 767 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 RFX4Q33E94 735 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 RIPPLY2Q5TAB7 128 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 RAET1GQ6H3X3 334 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 THAP5Q7Z6K1 395 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SYVN1Q86TM6 617 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 MAP4K3Q8IVH8 894 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SKA3Q8IX90 412 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 TAB3Q8N5C8 712 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 NSUN6Q8TEA1 469 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 FAR1Q8WVX9 515 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 R3HDM4Q96D70 268 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 FBXL20Q96IG2 436 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SFXN2Q96NB2 322 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 EIF2AK1Q9BQI3 630 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 STRA6Q9BX79 667 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 ALOXE3Q9BYJ1 711 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 PRKD2Q9BZL6 878 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 PPIL3Q9H2H8 161 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 TOR3AQ9H497 397 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 ATXN7L1Q9ULK2 861 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SSR3Q9UNL2 185 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 OTOFQ9HC10 1997 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 KIDINS220Q9ULH0 1771 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 A0A075B6Q4 140 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 B4DXG7 233 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 NEDD8-MDP1E9PL57 170 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SSX4O60224 188 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 NOBOXO60393 691 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 XYLBO75191 536 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 GLRA3O75311 464 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 HCKP08631 526 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 CHRM3P20309 590 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 FPR3P25089 353 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 CCR7P32248 378 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 RPS9P46781 194 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 RARRES1P49788 294 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 KIAA1024LP59773 190 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SNRPD2P62316 118 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SKP1P63208 163 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 ARID5AQ03989 594 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 ECH1Q13011 328 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SCARB2Q14108 478 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 IRF4Q15306 451 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 GUCA2BQ16661 112 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SEL1L3Q68CR1 1132 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 ARHGAP17Q68EM7 881 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SCYL2Q6P3W7 929 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC16A13Q7RTY0 426 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 CBARPQ8N350 705 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 C4orf32Q8N8J7 132 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 FAM181AQ8N9Y4 354 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 FBXO15Q8NCQ5 510 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 LNX1Q8TBB1 728 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 NR4A3Q92570 626 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 LMF1Q96S06 567 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 ZBTB3Q9H5J0 574 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 ZNF385DQ9H6B1 395 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 IL1RAPQ9NPH3 570 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 DDX4Q9NQI0 724 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 PCDHA10Q9Y5I2 948 aa10.57□□□□□ -0.72
PDLIM5-210ENST00000508216 A0A0U1RQV5 110 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 A0A1W2PPC1 479 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 FAM234BA2RU67 622 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 SLC35F4A4IF30 521 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 TMEM191CA6NGB0 347 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 B4GAT1O43505 415 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 PRKYO43930 277 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 HCN1O60741 890 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 APRTP07741 180 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 ERVK-10P10266 1014 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 LCP1P13796 627 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 DPEP1P16444 411 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 EPB42P16452 691 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 FGFR3P22607 806 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 RPS3P23396 243 aaKnown RBP eCLIP10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 WNT5AP41221 380 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 BAG6P46379 1132 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 DIO1P49895 249 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 RBP2P50120 134 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 EPHA5P54756 1037 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 ARPP19P56211 112 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 CD81P60033 236 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 ERVK-25P63136 954 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 TROAPQ12815 778 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 ILF3Q12906 894 aaKnown RBP eCLIP10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 PTP4A2Q12974 167 aa10.56□□□□□ -0.72
PDLIM5-210ENST00000508216 GAGE1Q13065 139 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms