RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 GEMP55040 296 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 KRTAP10-9P60411 292 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 RPA4Q13156 261 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 SLC5A12Q1EHB4 618 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 TMEM207Q6UWW9 146 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 NAPRTQ6XQN6 538 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 MCATQ8IVS2 390 aaKnown RBP8.8□□□□□ -1
PTPN20-216ENST00000506080 PRSS58Q8IYP2 241 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 DTWD1Q8N5C7 304 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 CLDN19Q8N6F1 224 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 LMNTD1Q8N9Z9 388 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 SLC35G2Q8TBE7 412 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 C8orf44Q96CB5 159 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 TRIM56Q9BRZ2 755 aaKnown RBP8.8□□□□□ -1
PTPN20-216ENST00000506080 CHRNA10Q9GZZ6 450 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 C10orf88Q9H8K7 445 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 WDR54Q9H977 334 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 VPS37BQ9H9H4 285 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 MRM3Q9HC36 420 aaKnown RBP8.8□□□□□ -1
PTPN20-216ENST00000506080 ZNF160Q9HCG1 818 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 CUTCQ9NTM9 273 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 ZDHHC3Q9NYG2 299 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 PTGFRNQ9P2B2 879 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 MAU2Q9Y6X3 613 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 MED13LQ71F56 2210 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 DYTNA2CJ06 578 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 C19orf84I3L1E1 186 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 MAP2K7O14733 419 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 DSCR3O14972 297 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 HPP00738 406 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 UQCRHP07919 91 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 TMEM253P0C7T8 217 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 ACRV1P26436 265 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 MST1P26927 711 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 MC4RP32245 332 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 PBX1P40424 430 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 GRIA3P42263 894 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 ARHGAP25P42331 645 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 CDKN2BP42772 138 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 CA7P43166 264 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 FANCCQ00597 558 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 TFDP2Q14188 446 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 TESK1Q15569 626 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 MTFR2Q6P444 385 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 TAS2R42Q7RTR8 314 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 SERPINA9Q86WD7 417 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 TBC1D21Q8IYX1 336 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 C2orf73Q8N5S3 287 aaPredicted RBP8.8□□□□□ -1
PTPN20-216ENST00000506080 SIRT6Q8N6T7 355 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 CCDC110Q8TBZ0 833 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 HEXDCQ8WVB3 486 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 P3H4Q92791 437 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 VPS50Q96JG6 964 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 VAT1Q99536 393 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 BPIFA3Q9BQP9 254 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 GORASP1Q9BQQ3 440 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 CRB3Q9BUF7 120 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.8□□□□□ -1
PTPN20-216ENST00000506080 SLC26A1Q9H2B4 701 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 SEMA3GQ9NS98 782 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 DDX56Q9NY93 547 aaKnown RBP8.8□□□□□ -1
PTPN20-216ENST00000506080 OR6C2Q9NZP2 312 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 SEC14L3Q9UDX4 400 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 NXT1Q9UKK6 140 aaKnown RBP8.8□□□□□ -1
PTPN20-216ENST00000506080 CAPN11Q9UMQ6 739 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 LUC7L2Q9Y383 392 aaKnown RBP8.8□□□□□ -1
PTPN20-216ENST00000506080 HRH3Q9Y5N1 445 aa8.8□□□□□ -1
PTPN20-216ENST00000506080 SETD2Q9BYW2 2564 aaPredicted RBP8.79□□□□□ -1
PTPN20-216ENST00000506080 IGLV3-16A0A075B6K0 115 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 TRAV17A0A0B4J275 112 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 LIN7AO14910 233 aaPredicted RBP8.79□□□□□ -1
PTPN20-216ENST00000506080 PRICKLE3O43900 615 aaPredicted RBP8.79□□□□□ -1
PTPN20-216ENST00000506080 ANXA9O76027 345 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 WISP2O76076 250 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 CRTAMO95727 393 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 THBS1P07996 1170 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 ACPPP15309 386 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 ACADLP28330 430 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 SSTR2P30874 369 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 TNFSF10P50591 281 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 ZNF140P52738 457 aaPredicted RBP8.79□□□□□ -1
PTPN20-216ENST00000506080 ADORA2A-AS1P86434 159 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 KLC1Q07866 573 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 MSLNQ13421 630 aaPredicted RBP8.79□□□□□ -1
PTPN20-216ENST00000506080 KIR2DS3Q14952 304 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 INAQ16352 499 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 SLC18A3Q16572 532 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 LRRC38Q5VT99 294 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 RANBP10Q6VN20 620 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 RPTNQ6XPR3 784 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 ARHGEF18Q6ZSZ5 1173 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 TAX1BP1Q86VP1 789 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 KBTBD2Q8IY47 623 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 TTC29Q8NA56 475 aaPredicted RBP8.79□□□□□ -1
PTPN20-216ENST00000506080 OR5K2Q8NHB8 316 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 BRIX1Q8TDN6 353 aaKnown RBP8.79□□□□□ -1
PTPN20-216ENST00000506080 ELMO1Q92556 727 aa8.79□□□□□ -1
PTPN20-216ENST00000506080 DNAJC1Q96KC8 554 aaKnown RBP8.79□□□□□ -1
PTPN20-216ENST00000506080 QKIQ96PU8 341 aaKnown RBP eCLIP8.79□□□□□ -1
PTPN20-216ENST00000506080 GBA3Q9H227 469 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms