RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 MRNIPQ6NTE8 343 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 FIGLAQ6QHK4 219 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 OVCH1Q7RTY7 1134 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 TAX1BP1Q86VP1 789 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 OTUD6BQ8N6M0 293 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 TTC29Q8NA56 475 aaPredicted RBP11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 Q8NA96 180 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 HOMER3Q9NSC5 361 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 IL1RAPL1Q9NZN1 696 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 LUZP4Q9P127 313 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 MAP10Q9P2G4 905 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 CIDEBQ9UHD4 219 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 TTC7AQ9ULT0 858 aaPredicted RBP11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 HECTD1Q9ULT8 2610 aa11.58□□□□□ -0.56
PDLIM7-214ENST00000505746 AGPSO00116 658 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 DSCR3O14972 297 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 SRPX2O60687 465 aaPredicted RBP11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 CNOT3O75175 753 aaKnown RBP11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 C1orf105O95561 183 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 ONECUT2O95948 504 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 FGGP02679 453 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 UMODP07911 640 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 MMP11P24347 488 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 NMBRP28336 390 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 GRIA3P42263 894 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 GCGRP47871 477 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 EIF3BP55884 814 aaKnown RBP11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 SOX8P57073 446 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 CRADDP78560 199 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 FAM214AQ32MH5 1076 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 RNF187Q5TA31 235 aaPredicted RBP11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 FCRL6Q6DN72 434 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 LRRC8BQ6P9F7 803 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 IGFL3Q6UXB1 125 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 ZNF662Q6ZS27 426 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 PPP1R32Q7Z5V6 425 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 IQCKQ8N0W5 287 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 LMNTD1Q8N9Z9 388 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 HMGCLL1Q8TB92 370 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 VPS50Q96JG6 964 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 TCF12Q99081 682 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 SELENOSQ9BQE4 189 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 KIFC1Q9BW19 673 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 WDR54Q9H977 334 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 MRM3Q9HC36 420 aaKnown RBP11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 ENAMQ9NRM1 1142 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 SLC22A11Q9NSA0 550 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 CUTCQ9NTM9 273 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 NXT1Q9UKK6 140 aaKnown RBP11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 B3GNT3Q9Y2A9 372 aa11.57□□□□□ -0.56
PDLIM7-214ENST00000505746 TCP11X1B4DZS4 312 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 H3BMM5 538 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 PRICKLE3O43900 615 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 VAPBO95292 243 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 CCDC175P0C221 793 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 TPSB2P20231 275 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 MGAT1P26572 445 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 FMO4P31512 558 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 SARNPP82979 210 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 AIMP2Q13155 320 aaKnown RBP11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 NAA25Q14CX7 972 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 TPSAB1Q15661 275 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 PLEKHN1Q494U1 663 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 ARMC3Q5W041 872 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 ZADH2Q8N4Q0 377 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 TRIM58Q8NG06 486 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 SSC4DQ8WTU2 575 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 ZNF285Q96NJ3 590 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 ILKAPQ9H0C8 392 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 SLC26A1Q9H2B4 701 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 ZNF552Q9H707 407 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 LZTFL1Q9NQ48 299 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 CUEDC1Q9NWM3 386 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 CDC23Q9UJX2 597 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 KLK4Q9Y5K2 254 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 NFS1Q9Y697 457 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 FAM169AQ9Y6X4 670 aa11.56□□□□□ -0.56
PDLIM7-214ENST00000505746 FITM1A5D6W6 292 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 CEP104O60308 925 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 ESR1P03372 595 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 PAMP19021 973 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 CHRM3P20309 590 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 ITGAXP20702 1163 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 MCM3P25205 808 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 ITGA3P26006 1051 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 ATP5DP30049 168 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 BDKRB1P46663 353 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 KCNJ1P48048 391 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 ADARP55265 1226 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 VSX2P58304 361 aaPredicted RBP11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 NKG7Q16617 165 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 TYSND1Q2T9J0 566 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 PRR30Q53SZ7 412 aaPredicted RBP11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 WASHC2DQ5SRD0 308 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 IRAK1BP1Q5VVH5 260 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 CNSTQ6PJW8 725 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 OR2L3Q8NG85 312 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 SNRNP40Q96DI7 357 aaKnown RBP11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 MFSD3Q96ES6 412 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 BIRC8Q96P09 236 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms