RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 VPS4BO75351 444 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 IL33O95760 270 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 C1QBP02746 253 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 PRR35P0CG20 571 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 PFKLP17858 780 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 DNAJB2P25686 324 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 CASP2P42575 452 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 MAD2L1BPQ15013 274 aaPredicted RBP12.98□□□□□ -0.33
LETM1-203ENST00000505551 BTBD16Q32M84 506 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 HIPK1Q86Z02 1210 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 RDH10Q8IZV5 341 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 LINC01465Q8N7H1 131 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 OR10Z1Q8NGY1 313 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 FBXO30Q8TB52 745 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 RNF139Q8WU17 664 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 RNF31Q96EP0 1072 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 NXF3Q9H4D5 531 aaKnown RBP12.98□□□□□ -0.33
LETM1-203ENST00000505551 EMC3Q9P0I2 261 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 CACNG4Q9UBN1 327 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 PKP3Q9Y446 797 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 STX7O15400 261 aaKnown RBP12.98□□□□□ -0.33
LETM1-203ENST00000505551 TREHO43280 583 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 RETP07949 1114 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 ADORA3P0DMS8 318 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 POU3F3P20264 500 aaPredicted RBP12.98□□□□□ -0.33
LETM1-203ENST00000505551 IGFBP5P24593 272 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 HOXA11P31270 313 aaPredicted RBP12.98□□□□□ -0.33
LETM1-203ENST00000505551 HERVK_113P63132 956 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 IL1RL1Q01638 556 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 FAM110CQ1W6H9 321 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 PKDCCQ504Y2 493 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 RBM20Q5T481 1227 aaKnown RBP12.98□□□□□ -0.33
LETM1-203ENST00000505551 LAMTOR1Q6IAA8 161 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 PKN3Q6P5Z2 889 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 DLEU7Q6UYE1 221 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 ARHGAP36Q6ZRI8 547 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 YIPF7Q8N8F6 280 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 TMEM40Q8WWA1 233 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 FATE1Q969F0 183 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 Q96MT0 163 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 ERVK-6Q9BXR3 956 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 B3GNT5Q9BYG0 378 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 PRRG3Q9BZD7 231 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 BRINP2Q9C0B6 783 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 MMP28Q9H239 520 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 RNF167Q9H6Y7 350 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 ASAH2Q9NR71 780 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 MIA3Q5JRA6 1907 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 LRRC37A2A6NM11 1700 aa12.98□□□□□ -0.33
LETM1-203ENST00000505551 PPP6CO00743 305 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 TSPAN4O14817 238 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 NCAM2O15394 837 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 OR2B3O76000 313 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 CYBBP04839 570 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 HLA-DMAP28067 261 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 POLR2JP52435 117 aaKnown RBP12.97□□□□□ -0.33
LETM1-203ENST00000505551 UFM1P61960 85 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 HYAL2Q12891 473 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 CSTF3Q12996 717 aaKnown RBP12.97□□□□□ -0.33
LETM1-203ENST00000505551 TBCEQ15813 527 aaPredicted RBP12.97□□□□□ -0.33
LETM1-203ENST00000505551 SLC14A2Q15849 920 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 TMEM65Q6PI78 240 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 AHSA2Q719I0 299 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 ACOT1Q86TX2 421 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 TLK2Q86UE8 772 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 C7orf31Q8N865 590 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 REPS1Q96D71 796 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 BBS2Q9BXC9 721 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 GOLGA2P5Q9HBQ8 144 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 MID1IP1Q9NPA3 183 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 PCOLCE2Q9UKZ9 415 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 BTRCQ9Y297 605 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 A0A075B6Q4 140 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 SLC12A8A0AV02 714 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 SLC22A3O75751 556 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 F9P00740 461 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 LINC00032P0C843 101 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 NFKB1P19838 968 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 SOX9P48436 509 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 MTPNP58546 118 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 TIGD6Q17RP2 521 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 SOWAHCQ53LP3 525 aaPredicted RBP12.97□□□□□ -0.33
LETM1-203ENST00000505551 CYP4Z1Q86W10 505 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 ZDHHC17Q8IUH5 632 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 HDHD5Q9BXW7 423 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 GABARAPL1Q9H0R8 117 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 SNX8Q9Y5X2 465 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 KCNE2Q9Y6J6 123 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 MYLKQ15746 1914 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 FAM234BA2RU67 622 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 LINC01387J3KSC0 135 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 ANKRD28O15084 1053 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 SEC22BO75396 215 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 MYL9P24844 172 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 TNFSF8P32971 234 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 SOX6P35712 828 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 KCNC1P48547 511 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms