RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ITPAQ9BY32 194 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MOV10Q9HCE1 1003 aaKnown RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 GTF2IRD1Q9UHL9 959 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 CLCA3PQ9Y6N3 262 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 A0A0G2JLL6 359 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 A0A0X1KG70 313 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 METTL15A6NJ78 407 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 M0R082 166 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 WDR47O94967 919 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 NDST3O95803 873 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SNAI1O95863 264 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 EIF2S1P05198 315 aaKnown RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 UROSP10746 265 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 BMP1P13497 986 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PIK3CBP42338 1070 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 GNG2P59768 71 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 COL9A2Q14055 689 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MFSD10Q14728 455 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 TSTQ16762 297 aaKnown RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 CXCL17Q6UXB2 119 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF621Q6ZSS3 439 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PRRT2Q7Z6L0 340 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 TLK2Q86UE8 772 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PIANPQ8IYJ0 282 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MINDY2Q8NBR6 621 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF548Q8NEK5 533 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 OR56A4Q8NGH8 313 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SPPL2AQ8TCT8 520 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 GPR151Q8TDV0 419 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 JPH3Q8WXH2 748 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PMEPA1Q969W9 287 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 BTN2A3PQ96KV6 586 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SLC2A13Q96QE2 648 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 IPPKQ9H8X2 491 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MIOSQ9NXC5 875 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 TAS2R13Q9NYV9 303 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 ITM2BQ9Y287 266 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MAU2Q9Y6X3 613 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 E9PAM4 449 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 M0QX08 132 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 LDB2O43679 373 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PGRP06401 933 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 FGF4P08620 206 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 CCNYL3P0C7X3 344 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 TGFBR2P37173 567 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 MLLT3P42568 568 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 TOP3AQ13472 1001 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 CDK10Q15131 360 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 GNASQ5JWF2 1037 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 FAM171A1Q5VUB5 890 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SPATA19Q7Z5L4 167 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SPATA2LQ8IUW3 424 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 TIGD4Q8IY51 512 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 CLDN19Q8N6F1 224 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 CHAC2Q8WUX2 184 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SLC38A4Q969I6 547 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 GTPBP3Q969Y2 492 aaKnown RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 IL4I1Q96RQ9 567 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 APOL4Q9BPW4 351 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 CCM2Q9BSQ5 444 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PRKD2Q9BZL6 878 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 OR2B2Q9GZK3 357 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 SP140LQ9H930 580 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 OSGIN1Q9UJX0 560 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PCTPQ9UKL6 214 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 ARIH1Q9Y4X5 557 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 PCDHGC4Q9Y5F7 938 aa7.44□□□□□ -1.22
NEDD9-208ENST00000504387 COL11A1P12107 1806 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-208ENST00000504387 FAM172BPA6NC97 362 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 EFCAB10A6NFE3 127 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 SAGE2PA6NJ88 616 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 PIRO00625 290 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 HAT1O14929 419 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 MUSKO15146 869 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 PSMD3O43242 534 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 SEMA3DO95025 777 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 SOX3P41225 446 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 PNPLA4P41247 253 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 P2RX3P56373 397 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 CAV3P56539 151 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 CBX2Q14781 532 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 MAD2L1BPQ15013 274 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 CCL14Q16627 93 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 PLEKHG6Q3KR16 790 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 SYT6Q5T7P8 510 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 CACHD1Q5VU97 1274 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 CPZQ66K79 652 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 LRRC66Q68CR7 880 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 SIGIRRQ6IA17 410 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 PSAPL1Q6NUJ1 521 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF544Q6NX49 715 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 RAB43Q86YS6 212 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 LAX1Q8IWV1 398 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 MSRB3Q8IXL7 192 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 GPC2Q8N158 579 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF557Q8N988 423 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 C3orf58Q8NDZ4 430 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF675Q8TD23 568 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 PIK3R3Q92569 461 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 GTF2H4Q92759 462 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms