RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CCNFP41002 786 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 TTPAP49638 278 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 TMPRSS15P98073 1019 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 MFAP5Q13361 173 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ART3Q13508 389 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 OLIG2Q13516 323 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 SLC9A5Q14940 896 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 LLGL1Q15334 1064 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ZRSR2Q15696 482 aaKnown RBP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 SYTL3Q4VX76 610 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 FAM69BQ5VUD6 431 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 IRAK1BP1Q5VVH5 260 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 C1QL3Q5VWW1 255 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ATG9BQ674R7 924 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ZNF324BQ6AW86 544 aaPredicted RBP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ISLR2Q6UXK2 745 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 C4orf22Q6V702 233 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 RIPOR1Q6ZS17 1223 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 TTLL10Q6ZVT0 673 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 COX15Q7KZN9 410 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 RNF44Q7L0R7 432 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 RAB42Q8N4Z0 105 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 UBL4BQ8N7F7 174 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 TTC29Q8NA56 475 aaPredicted RBP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 LINC01555Q8NAE3 123 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 OR4L1Q8NH43 312 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ALG3Q92685 438 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 HAS2Q92819 552 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 RNF31Q96EP0 1072 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 PANX3Q96QZ0 392 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 MFRPQ9BY79 579 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 TGIF2Q9GZN2 237 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 XKR8Q9H6D3 395 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 EPS8L2Q9H6S3 715 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 IGSF5Q9NSI5 407 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 CUTCQ9NTM9 273 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 FAM8A1Q9UBU6 413 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 NOVA2Q9UNW9 492 aaKnown RBP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 NTNG1Q9Y2I2 539 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 PCDHGB6Q9Y5F9 930 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 KLF2Q9Y5W3 355 aaPredicted RBP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 PRSS21Q9Y6M0 314 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 PRRC2CQ9Y520 2896 aaKnown RBP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 CROCCQ5TZA2 2017 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 NOTCH2Q04721 2471 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 CREBBPQ92793 2442 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 CELSR2Q9HCU4 2923 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 LOC102723996A0A087X1L8 192 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 HYKKA2RU49 373 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 CCDC162PA2VCL2 907 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 F5H423 210 aaPredicted RBP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 CCL22O00626 93 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 TXNDC9O14530 226 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 PRMT5O14744 637 aaPredicted RBP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 PRPF4O43172 522 aaKnown RBP eCLIP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 USP1O94782 785 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 MATN4O95460 622 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 GOT2P00505 430 aaKnown RBP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 PRSS56P0CW18 603 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 MYBL2P10244 700 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 ICAM2P13598 275 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 AGAP20933 346 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 ELAVL4P26378 380 aaKnown RBP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 SOX11P35716 441 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 HSD17B2P37059 387 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 GLRBP48167 497 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 SPARCL1Q14515 664 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 GBX1Q14549 363 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 POU6F1Q14863 301 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 ARHGAP19Q14CB8 494 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 SF1Q15637 639 aaKnown RBP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 OASLQ15646 514 aaKnown RBP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 MUM1Q2TAK8 710 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 DEFB110Q30KQ9 67 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 FASTKD1Q53R41 847 aaKnown RBP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 TSTD2Q5T7W7 516 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 C1orf189Q5VU69 101 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 GARNL3Q5VVW2 1013 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 MTFR2Q6P444 385 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 TTC23LQ6PF05 361 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 DRICH1Q6PGQ1 229 aaPredicted RBP5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 FIGLAQ6QHK4 219 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 ZNF534Q76KX8 674 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 NDUFAF7Q7L592 441 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 PCGF5Q86SE9 256 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 BCORP1Q8N888 145 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 OR11G2Q8NGC1 345 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 OR2A1Q8NGT9 310 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 DNAJB8Q8NHS0 232 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 DNAJB14Q8TBM8 379 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 GRHL3Q8TE85 626 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 NAT14Q8WUY8 206 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 PSMF1Q92530 271 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 HES6Q96HZ4 224 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 NRTNQ99748 197 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 SELENOSQ9BQE4 189 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 KLHL25Q9H0H3 589 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 P2RY12Q9H244 342 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 TSPY26PQ9H489 355 aa5.84□□□□□ -1.47
LSM3P4-201ENST00000502948 C10orf88Q9H8K7 445 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms