RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 CPNE6O95741 557 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 TOP3BO95985 862 aaKnown RBP17■□□□□ 0.31
CTDSP1-215ENST00000498160 MTHFD2P13995 350 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 CPA3P15088 417 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 RPA3P35244 121 aaPredicted RBP17■□□□□ 0.31
CTDSP1-215ENST00000498160 ABATP80404 500 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 PCBP2Q15366 365 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■■□□ 18.5
CTDSP1-215ENST00000498160 CCSMST1Q4G0I0 132 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 TTMPQ5BVD1 217 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 LCTLQ6UWM7 567 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 DENND1AQ8TEH3 1009 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 FAM111AQ96PZ2 611 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 TBC1D10AQ9BXI6 508 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 ABCG4Q9H172 646 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 LRRN3Q9H3W5 708 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 GPRC5BQ9NZH0 403 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 COPG2Q9UBF2 871 aa17■□□□□ 0.31
CTDSP1-215ENST00000498160 APOBEC2Q9Y235 224 aaKnown RBP17■□□□□ 0.31
CTDSP1-215ENST00000498160 GOLGA4Q13439 2230 aaKnown RBP17■□□□□ 0.31
CTDSP1-215ENST00000498160 TMEM120BA0PK00 339 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 OR6C74A6NCV1 312 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 NCF1BA6NI72 391 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 NCF1CA8MVU1 366 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 H3BQF6 201 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 TMX2-CTNND1H3BSU7 103 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 BIRC5O15392 142 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 MAP3K7O43318 606 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 KATNA1O75449 491 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 NCF1P14598 390 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 CMPK1P30085 196 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 GMPRP36959 345 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 PLA2G5P39877 138 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 SLC6A12P48065 614 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 KCNC1P48547 511 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 DNAJB13P59910 316 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 TBPL1P62380 186 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 NAE1Q13564 534 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 PFKFB4Q16877 469 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 SLC5A12Q1EHB4 618 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 THEMIS2Q5TEJ8 643 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 C16orf46Q6P387 395 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 ADGRF3Q8IZF5 1079 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 TMEM151AQ8N4L1 468 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 PTGR2Q8N8N7 351 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 MAGEB10Q96LZ2 347 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 GFM1Q96RP9 751 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 SGPP1Q9BX95 441 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 C1QTNF3Q9BXJ4 246 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 ACTR10Q9NZ32 417 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 ANKMY1Q9P2S6 941 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 OPTCQ9UBM4 332 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 EMCNQ9ULC0 261 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 PLAGL1Q9UM63 463 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 KCNE2Q9Y6J6 123 aa16.99■□□□□ 0.31
CTDSP1-215ENST00000498160 MN1Q10571 1320 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 USP34Q70CQ2 3546 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 PRAMEF33A0A0G2JMD5 474 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 GSAPA4D1B5 854 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 A8MT66 165 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 ISM1B1AKI9 464 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 TM4SF5O14894 197 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 B4GAT1O43505 415 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 RPLP0P05388 317 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 ETV4P43268 484 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 OR1D5P58170 312 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 HERVK_113P63132 956 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 PPP2R2AP63151 447 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 SPIDRQ14159 915 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 PTCHD3Q3KNS1 767 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 PERM1Q5SV97 790 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 HHATQ5VTY9 493 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 PRAMEF13Q5VWM6 474 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 LIPMQ5VYY2 423 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 TMEM71Q6P5X7 295 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 TRIM42Q8IWZ5 723 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 LRRC56Q8IYG6 542 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 Q8N9G6 341 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 LINC01555Q8NAE3 123 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 ARMC2Q8NEN0 867 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 GRAMD1AQ96CP6 724 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 MED8Q96G25 268 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 IL17FQ96PD4 163 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 SELENOSQ9BQE4 189 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 ERVK-6Q9BXR3 956 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 CD244Q9BZW8 370 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 XKR8Q9H6D3 395 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 DNAJC11Q9NVH1 559 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 POMT2Q9UKY4 750 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 DYRK1BQ9Y463 629 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 ANGPTL3Q9Y5C1 460 aa16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 RIF1Q5UIP0 2472 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-215ENST00000498160 ZFHX2Q9C0A1 2572 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 TLCD2A6NGC4 264 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 K7EPI3 171 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 BTN3A3O00478 584 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 NTN3O00634 580 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 TRIM13O60858 407 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 WDR47O94967 919 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 SNUPNO95149 360 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 C9P02748 559 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms