RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 RASGRF2O14827 1237 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 PFDN6O15212 129 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 IPO13O94829 963 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 AGFG2O95081 481 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 UQCRFS1P47985 274 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 RAPSNQ13702 412 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 INPP5JQ15735 1006 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 CYP2A13Q16696 494 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 TCTE1Q5JU00 501 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 DCAF10Q5QP82 559 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 SLC6A19Q695T7 634 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 DRICH1Q6PGQ1 229 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 FIGLAQ6QHK4 219 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 TTLL10Q6ZVT0 673 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 OTOAQ7RTW8 1153 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 SDCCAG8Q86SQ7 713 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 TAX1BP1Q86VP1 789 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 FAM20CQ8IXL6 584 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 GALNT16Q8N428 558 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 TTC29Q8NA56 475 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 LINC01555Q8NAE3 123 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 LKAAEAR1Q8TD35 194 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 MAGEC3Q8TD91 643 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 TM9SF4Q92544 642 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 RAD51AP1Q96B01 352 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 FOPNLQ96NB1 174 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 IL17FQ96PD4 163 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 P4HTMQ9NXG6 502 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 MARCH4Q9P2E8 410 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 CIDEBQ9UHD4 219 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 KLHL20Q9Y2M5 609 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 SNRNP200O75643 2136 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 BLACEA4D250 179 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 CTSBP07858 339 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 RPS3P23396 243 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 CCNFP41002 786 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 EIF3BP55884 814 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 CRADDP78560 199 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 CDK16Q00536 496 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 GRM7Q14831 915 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 MYBPC3Q14896 1274 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 YOD1Q5VVQ6 348 aaPredicted RBP11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 MRNIPQ6NTE8 343 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 MRPL14Q6P1L8 145 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 RBMXL3Q8N7X1 1067 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 ZUFSPQ96AP4 578 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 FKBP10Q96AY3 582 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 NACC2Q96BF6 587 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 PSMG3-AS1Q96PY0 264 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 SELENOSQ9BQE4 189 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 MENTQ9BUN1 341 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 P2RY12Q9H244 342 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 ATP13A2Q9NQ11 1180 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 HOMER3Q9NSC5 361 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 TREX1Q9NSU2 369 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 IL1RAPL1Q9NZN1 696 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 LUZP4Q9P127 313 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 CCDC88CQ9P219 2028 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 FER1L5A0AVI2 2057 aa11.29□□□□□ -0.6
NUDCD3-211ENST00000497978 TARM1B6A8C7 271 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 H3BMM5 538 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 AGPSO00116 658 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 DSCR3O14972 297 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 VAPBO95292 243 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 C1orf105O95561 183 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 FGGP02679 453 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 ALBP02768 609 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 CCDC175P0C221 793 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 NMBRP28336 390 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 GRIA3P42263 894 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 SARNPP82979 210 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 AIMP2Q13155 320 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 GRB7Q14451 532 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 NAA25Q14CX7 972 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 SIX1Q15475 284 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 FAM214AQ32MH5 1076 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 RNF187Q5TA31 235 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 FCRL6Q6DN72 434 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 PPP1R32Q7Z5V6 425 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 IQCKQ8N0W5 287 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 ZADH2Q8N4Q0 377 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 Q8NA96 180 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 VPS50Q96JG6 964 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 KIFC1Q9BW19 673 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 ILKAPQ9H0C8 392 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 WDR54Q9H977 334 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 MRM3Q9HC36 420 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 LZTFL1Q9NQ48 299 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 CUTCQ9NTM9 273 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 CDC23Q9UJX2 597 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 B3GNT3Q9Y2A9 372 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 FAM169AQ9Y6X4 670 aa11.28□□□□□ -0.6
NUDCD3-211ENST00000497978 SRPX2O60687 465 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-211ENST00000497978 CNOT3O75175 753 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-211ENST00000497978 ONECUT2O95948 504 aa11.27□□□□□ -0.61
NUDCD3-211ENST00000497978 UMODP07911 640 aa11.27□□□□□ -0.61
NUDCD3-211ENST00000497978 PAMP19021 973 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms