RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 CPNE9Q8IYJ1 553 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 MYO1HQ8N1T3 1032 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 C19orf47Q8N9M1 422 aaKnown RBP11.07□□□□□ -0.64
HLA-B-254ENST00000497377 LINC01555Q8NAE3 123 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 FLVCR1-AS1Q8TAF5 88 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 NAF1Q96HR8 494 aaKnown RBP11.07□□□□□ -0.64
HLA-B-254ENST00000497377 VPS39Q96JC1 886 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 TRAPPC9Q96Q05 1148 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 CPNE1Q99829 537 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 CTRCQ99895 268 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 SPRY4Q9C004 299 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 RHOJQ9H4E5 214 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 APMAPQ9HDC9 416 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 SPHK1Q9NYA1 384 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 SLC17A6Q9P2U8 582 aa11.07□□□□□ -0.64
HLA-B-254ENST00000497377 DMGDHQ9UI17 866 aaKnown RBP11.07□□□□□ -0.64
HLA-B-254ENST00000497377 RUVBL2Q9Y230 463 aaKnown RBP11.07□□□□□ -0.64
HLA-B-254ENST00000497377 SLC16A5O15375 505 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 STK17BO94768 372 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 MT-ND3P03897 115 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 EBLN1P0CF75 366 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 CD46P15529 392 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 ST6GAL1P15907 406 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 CYP2A7P20853 494 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 FDXRP22570 491 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 OAS2P29728 719 aaKnown RBP11.06□□□□□ -0.64
HLA-B-254ENST00000497377 GP5P40197 560 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 TMPRSS3P57727 454 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 GPX6P59796 221 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 TIAL1Q01085 375 aaKnown RBP eCLIP11.06□□□□□ -0.64
HLA-B-254ENST00000497377 KCNAB1Q14722 419 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.06□□□□□ -0.64
HLA-B-254ENST00000497377 PAQR3Q6TCH7 311 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 CAPN12Q6ZSI9 719 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 NLGN4XQ8N0W4 816 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 NLGN4YQ8NFZ3 816 aaPredicted RBP11.06□□□□□ -0.64
HLA-B-254ENST00000497377 MCOLN3Q8TDD5 553 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 HNRNPLLQ8WVV9 542 aaKnown RBP11.06□□□□□ -0.64
HLA-B-254ENST00000497377 ANKRD7Q92527 254 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 PMEPA1Q969W9 287 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 PDLIM5Q96HC4 596 aaKnown RBP11.06□□□□□ -0.64
HLA-B-254ENST00000497377 ELMO2Q96JJ3 720 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 PPM1MQ96MI6 270 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 CCNL2Q96S94 520 aaPredicted RBP11.06□□□□□ -0.64
HLA-B-254ENST00000497377 FMO2Q99518 471 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 NRTNQ99748 197 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 MCMBPQ9BTE3 642 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 ULBP3Q9BZM4 244 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 POPDC3Q9HBV1 291 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 LRRC4CQ9HCJ2 640 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 PILRAQ9UKJ1 303 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 PSAT1Q9Y617 370 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 CELSR3Q9NYQ7 3312 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 PCM1Q15154 2024 aa11.06□□□□□ -0.64
HLA-B-254ENST00000497377 FAM95CA0A1B0GW59 222 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 PRICKLE3O43900 615 aaPredicted RBP11.05□□□□□ -0.64
HLA-B-254ENST00000497377 RAD1O60671 282 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 DLGAP3O95886 979 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 ITPKBP27987 946 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 PEBP1P30086 187 aaKnown RBP11.05□□□□□ -0.64
HLA-B-254ENST00000497377 PHBP35232 272 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 SLC12A2P55011 1212 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 POU4F1Q01851 419 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 SF1Q15637 639 aaKnown RBP11.05□□□□□ -0.64
HLA-B-254ENST00000497377 CCSMST1Q4G0I0 132 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 MANEAQ5SRI9 462 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 FBXO38Q6PIJ6 1188 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 UBE2R2Q712K3 238 aaPredicted RBP11.05□□□□□ -0.64
HLA-B-254ENST00000497377 PIWIL4Q7Z3Z4 852 aaKnown RBP11.05□□□□□ -0.64
HLA-B-254ENST00000497377 IFT20Q8IY31 132 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 CACNA2D3Q8IZS8 1091 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 NKAPQ8N5F7 415 aaKnown RBP11.05□□□□□ -0.64
HLA-B-254ENST00000497377 ESX1Q8N693 406 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 IL22RA1Q8N6P7 574 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 LMNTD1Q8N9Z9 388 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 DENND1AQ8TEH3 1009 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 EEF1AKMT1Q8WVE0 214 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 SMPDL3AQ92484 453 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 NKD1Q969G9 470 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 ZNF501Q96CX3 271 aaPredicted RBP11.05□□□□□ -0.64
HLA-B-254ENST00000497377 LINGO1Q96FE5 620 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 TSPAN17Q96FV3 270 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 IL17FQ96PD4 163 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 PKP4Q99569 1192 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 EFHD1Q9BUP0 239 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 SLC12A9Q9BXP2 914 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 TRIM54Q9BYV2 358 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 PARVBQ9HBI1 364 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 SMYD2Q9NRG4 433 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 SERTAD3Q9UJW9 196 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 KLK4Q9Y5K2 254 aa11.05□□□□□ -0.64
HLA-B-254ENST00000497377 SNRNP200O75643 2136 aaKnown RBP11.05□□□□□ -0.64
HLA-B-254ENST00000497377 PTPRQQ9UMZ3 2332 aa11.04□□□□□ -0.64
HLA-B-254ENST00000497377 PABPN1LA6NDY0 278 aaKnown RBP11.04□□□□□ -0.64
HLA-B-254ENST00000497377 CXorf49A8MYA2 514 aaPredicted RBP11.04□□□□□ -0.64
HLA-B-254ENST00000497377 TARM1B6A8C7 271 aa11.04□□□□□ -0.64
HLA-B-254ENST00000497377 CCNDBP1O95273 360 aa11.04□□□□□ -0.64
HLA-B-254ENST00000497377 SLC16A8O95907 504 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms