RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PDGFBP01127 241 aaPredicted RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 LDLRP01130 860 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 IL1BP01584 269 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 LCKP06239 509 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 MMP2P08253 660 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 UQCRFS1P1P0C7P4 283 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ETS2P15036 469 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 BRAFP15056 766 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 DDX6P26196 483 aaKnown RBP eCLIP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 TNFRSF8P28908 595 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 APOBEC3AP31941 199 aaPredicted RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CRHR1P34998 444 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 GGT5P36269 586 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 OMPP47874 163 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CEBPDP49716 269 aaPredicted RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF75DP51815 510 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CEBPGP53567 150 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CLDN8P56748 225 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 PRPS1P60891 318 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 REEP5Q00765 189 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF45Q02386 682 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CDH17Q12864 832 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 EPS8Q12929 822 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 NFATC3Q12968 1075 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 GPR68Q15743 365 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 PPP1R3AQ16821 1122 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 PNLIPRP3Q17RR3 467 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 MOGAT2Q3SYC2 334 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 LBHQ53QV2 105 aaPredicted RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ARHGAP15Q53QZ3 475 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ZMAT1Q5H9K5 638 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 NHSL2Q5HYW2 709 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CLEC6AQ6EIG7 209 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ETFRF1Q6IPR1 90 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 RWDD4Q6NW29 188 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM111BQ6SJ93 734 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 USP49Q70CQ1 688 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 TRILQ7L0X0 811 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 LRRC8DQ7L1W4 858 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 PLPPR4Q7Z2D5 763 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 SMIM15Q7Z3B0 74 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 TRMT11Q7Z4G4 463 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 BIVMQ86UB2 503 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF589Q86UQ0 364 aaPredicted RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 GGNQ86UU5 652 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 RASGRP3Q8IV61 690 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 GID4Q8IVV7 300 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 OFCC1Q8IZS5 231 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 DSELQ8IZU8 1212 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 UBE2J2Q8N2K1 259 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 METTL25Q8N6Q8 603 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 LRRC17Q8N6Y2 441 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 KDM1BQ8NB78 822 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 C19orf18Q8NEA5 215 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF596Q8TC21 504 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 STT3BQ8TCJ2 826 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 REPS1Q96D71 796 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ERLEC1Q96DZ1 483 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 FER1L6-AS2Q96M78 137 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 XPO6Q96QU8 1125 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 OR14A2Q96R54 314 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 TGS1Q96RS0 853 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM209Q96SK2 561 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 INTS14Q96SY0 518 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 FERMT1Q9BQL6 677 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 SEMA4CQ9C0C4 833 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 KATNBL1Q9H079 304 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 TP63Q9H3D4 680 aaPredicted RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 GPRC5DQ9NZD1 345 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 MRPL15Q9P015 296 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 APOBEC3BQ9UH17 382 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 IL20RAQ9UHF4 553 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC12A4Q9UP95 1085 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 NOC2LQ9Y3T9 749 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 RBM8AQ9Y5S9 174 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CPQQ9Y646 472 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 FKBP7Q9Y680 259 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 MROH7Q68CQ1 1323 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 SALL3Q9BXA9 1300 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 TNRQ92752 1358 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC22A2O15244 555 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 COCHO43405 550 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 CDC14BO60729 498 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 DTNBO60941 627 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 AK1P00568 194 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 IFNA6P05013 189 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 GP1BAP07359 652 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 SAGP10523 405 aaPredicted RBP3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF8P17098 575 aaPredicted RBP3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 XRCC1P18887 633 aaPredicted RBP3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 CPT2P23786 658 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 PTPN6P29350 595 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 CHRNA3P32297 505 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 PAFAH1B1P43034 410 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 SYKP43405 635 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 YPEL5P62699 121 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 PSPHP78330 225 aa3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 SRSF5Q13243 272 aaKnown RBP3.03□□□□□ -1.93
SNRNP48-202ENST00000496946 TOP3AQ13472 1001 aaPredicted RBP3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms