RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SRSF6Q13247 344 aaKnown RBP15.37■□□□□ 0.05
LIME1-209ENST00000494776 MAP7Q14244 749 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 CYHR1Q6ZMK1 362 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 CDHR3Q6ZTQ4 885 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 CEP128Q6ZU80 1094 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 TIPARPQ7Z3E1 657 aaKnown RBP15.37■□□□□ 0.05
LIME1-209ENST00000494776 GPR155Q7Z3F1 870 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 CTAGE3PQ8IX95 158 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 FLVCR1-AS1Q8TAF5 88 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 MCOLN3Q8TDD5 553 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 ZNF501Q96CX3 271 aaPredicted RBP15.37■□□□□ 0.05
LIME1-209ENST00000494776 LINGO1Q96FE5 620 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 SPRY4Q9C004 299 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 SLC7A5P2Q9GIP4 190 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 PRORYQ9H606 182 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 IRAK4Q9NWZ3 460 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 CELSR3Q9NYQ7 3312 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 FAM95CA0A1B0GW59 222 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 TCRBV9S1A1TA0A576 114 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 GFYI3L273 518 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 PIAS1O75925 651 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 TIAF1O95411 115 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 C8GP07360 202 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 MAGP20916 626 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 FDXRP22570 491 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 STX2P32856 288 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 RPA3P35244 121 aaPredicted RBP15.36■□□□□ 0.05
LIME1-209ENST00000494776 PNLIPRP1P54315 467 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 SLC12A2P55011 1212 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 ABHD18Q0P651 414 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 FASTKQ14296 549 aaKnown RBP15.36■□□□□ 0.05
LIME1-209ENST00000494776 ARHGAP19Q14CB8 494 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 CYP2A13Q16696 494 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 ZC3HC1Q86WB0 502 aaKnown RBP15.36■□□□□ 0.05
LIME1-209ENST00000494776 SYTL1Q8IYJ3 562 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 GPR135Q8IZ08 494 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 FBXO15Q8NCQ5 510 aaPredicted RBP15.36■□□□□ 0.05
LIME1-209ENST00000494776 HMGCLL1Q8TB92 370 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 DENND1AQ8TEH3 1009 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 SMPDL3AQ92484 453 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 SEC14L1Q92503 715 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 VPS39Q96JC1 886 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 OLFM1Q99784 485 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 EFHD1Q9BUP0 239 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 RHOJQ9H4E5 214 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 GPN2Q9H9Y4 310 aaPredicted RBP15.36■□□□□ 0.05
LIME1-209ENST00000494776 FAM60AQ9NP50 221 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 ABCF3Q9NUQ8 709 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 DMGDHQ9UI17 866 aaKnown RBP15.36■□□□□ 0.05
LIME1-209ENST00000494776 SSUH2Q9Y2M2 353 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 KLHL20Q9Y2M5 609 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 ADAMTS20P59510 1910 aa15.36■□□□□ 0.05
LIME1-209ENST00000494776 SDK2Q58EX2 2172 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 E7EQ34 232 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 K7ENP7 123 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 EFSO43281 561 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 CPNE3O75131 537 aaKnown RBP15.35■□□□□ 0.05
LIME1-209ENST00000494776 FKBP9O95302 570 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 HIST1H2AGP0C0S8 130 aaPredicted RBP15.35■□□□□ 0.05
LIME1-209ENST00000494776 MSL3P1P0C860 447 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 LIFP15018 202 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 HIST1H2ADP20671 130 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 PSMB5P28074 263 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 ITGA1P56199 1179 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 GPX6P59796 221 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 ZIC1Q15915 447 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 DEFB110Q30KQ9 67 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 INO80CQ6PI98 192 aaPredicted RBP15.35■□□□□ 0.05
LIME1-209ENST00000494776 FIGLAQ6QHK4 219 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 SUSD1Q6UWL2 747 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 CYS1Q717R9 158 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 OR1L3Q8NH93 324 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 CLIP3Q96DZ5 547 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 HIST1H2AHQ96KK5 128 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 MIPEPQ99797 713 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 CPNE1Q99829 537 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 HIST1H2AJQ99878 128 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 H2AFJQ9BTM1 129 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 ACAT2Q9BWD1 397 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 FAM129AQ9BZQ8 928 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 TWSG1Q9GZX9 223 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 TSPYL1Q9H0U9 437 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 LRRC4CQ9HCJ2 640 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 SMYD2Q9NRG4 433 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 ZDHHC18Q9NUE0 388 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 PADI1Q9ULC6 663 aa15.35■□□□□ 0.05
LIME1-209ENST00000494776 LOC101059948A0A1B0GTJ6 334 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 FAM159BA6NKW6 160 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 CXorf49A8MYA2 514 aaPredicted RBP15.34■□□□□ 0.05
LIME1-209ENST00000494776 SLC16A5O15375 505 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 SLC16A8O95907 504 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 CMPK1P30085 196 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 STAT5AP42229 794 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 PGGT1BP53609 377 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 SP140Q13342 867 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 THEMIS2Q5TEJ8 643 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 KIAA1614Q5VZ46 1190 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 PPM1NQ8N819 430 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 PPFIBP2Q8ND30 876 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 OR2L3Q8NG85 312 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms