RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SLC22A15Q8IZD6 547 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 UBL4BQ8N7F7 174 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 TTC13Q8NBP0 860 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 SLC35B2Q8TB61 432 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 TM9SF4Q92544 642 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 DLG3Q92796 817 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 CNDP1Q96KN2 507 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 MENTQ9BUN1 341 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 CHRNA10Q9GZZ6 450 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 ETNK1Q9HBU6 452 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 CUTCQ9NTM9 273 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 CTSFQ9UBX1 484 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 NOVA2Q9UNW9 492 aaKnown RBP12.13□□□□□ -0.47
SKA1-205ENST00000494518 RUVBL2Q9Y230 463 aaKnown RBP12.13□□□□□ -0.47
SKA1-205ENST00000494518 MAU2Q9Y6X3 613 aa12.13□□□□□ -0.47
SKA1-205ENST00000494518 A0A1B0GX78 115 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 HEATR9A2RTY3 570 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 BTNL10A8MVZ5 291 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 SOCS6O14544 535 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 PSMD3O43242 534 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 KDM1AO60341 852 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 NRP2O60462 931 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 IPO13O94829 963 aaKnown RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 IFNB1P01574 187 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 HOXB1P14653 301 aaPredicted RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 ETS1P14921 441 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 CD9P21926 228 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 PSMA3P25788 255 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 PSMB5P28074 263 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 GCGRP47871 477 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 CDH17Q12864 832 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 AIMP2Q13155 320 aaKnown RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 GRB7Q14451 532 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 SF1Q15637 639 aaKnown RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 NKG7Q16617 165 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 FASTKD1Q53R41 847 aaKnown RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 DNAJC21Q5F1R6 531 aaKnown RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 CRB2Q5IJ48 1285 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 TSTD2Q5T7W7 516 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 PRAMEF13Q5VWM6 474 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 FIGLAQ6QHK4 219 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 OVCH1Q7RTY7 1134 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 LINC00523Q86TU6 105 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 DCUN1D3Q8IWE4 304 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 OR4L1Q8NH43 312 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 UBE2Q2Q8WVN8 375 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 PANX2Q96RD6 677 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 SPSB2Q99619 263 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 WDR77Q9BQA1 342 aaPredicted RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 SELENOSQ9BQE4 189 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 DESI2Q9BSY9 194 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 MARCH4Q9P2E8 410 aaPredicted RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 STOX2Q9P2F5 926 aaPredicted RBP12.12□□□□□ -0.47
SKA1-205ENST00000494518 SLC39A10Q9ULF5 831 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 HS3ST3B1Q9Y662 390 aa12.12□□□□□ -0.47
SKA1-205ENST00000494518 WIPF3A6NGB9 483 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 E7EVH7 732 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 DSCR3O14972 297 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 ZNF189O75820 626 aaPredicted RBP12.11□□□□□ -0.47
SKA1-205ENST00000494518 MED26O95402 600 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 GAS8O95995 478 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 CD63P08962 238 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 MMP11P24347 488 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 ZNF75DP51815 510 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 VSX2P58304 361 aaPredicted RBP12.11□□□□□ -0.47
SKA1-205ENST00000494518 PRAMEP78395 509 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 PLOD1Q02809 727 aaPredicted RBP12.11□□□□□ -0.47
SKA1-205ENST00000494518 SNX1Q13596 522 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 RBBP7Q16576 425 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 CCSMST1Q4G0I0 132 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 KIRREL2Q6UWL6 708 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 LINC00696Q6ZRV3 163 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 TTC29Q8NA56 475 aaPredicted RBP12.11□□□□□ -0.47
SKA1-205ENST00000494518 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 SKA2Q8WVK7 121 aaPredicted RBP12.11□□□□□ -0.47
SKA1-205ENST00000494518 FKBP10Q96AY3 582 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 CALR3Q96L12 384 aaKnown RBP12.11□□□□□ -0.47
SKA1-205ENST00000494518 TTC1Q99614 292 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 TCAF1Q9Y4C2 921 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 NFS1Q9Y697 457 aa12.11□□□□□ -0.47
SKA1-205ENST00000494518 SCN2AQ99250 2005 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 RASGRF2O14827 1237 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 FFAR3O14843 346 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 GPR42O15529 346 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 KLHL41O60662 606 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 CTSVO60911 334 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 GPC4O75487 556 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 RPN2P04844 631 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 EIF2S1P05198 315 aaKnown RBP12.1□□□□□ -0.47
SKA1-205ENST00000494518 APOA4P06727 396 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 ARSFP54793 590 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 SOX8P57073 446 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 CRADDP78560 199 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 Q0VFX4 171 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 CDC16Q13042 620 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 GRM7Q14831 915 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 KCTD19Q17RG1 926 aaPredicted RBP12.1□□□□□ -0.47
SKA1-205ENST00000494518 TUBB8Q3ZCM7 444 aa12.1□□□□□ -0.47
SKA1-205ENST00000494518 AGAP7PQ5VUJ5 663 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms