RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 VASH2Q86V25 355 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 PPP1R3BQ86XI6 285 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 CNTN4Q8IWV2 1026 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 CTAGE3PQ8IX95 158 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 CACNA2D3Q8IZS8 1091 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 IL22RA1Q8N6P7 574 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 CD200R1Q8TD46 325 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 CDKL2Q92772 493 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 ZPBPQ9BS86 351 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 ABCF3Q9NUQ8 709 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 IRAK4Q9NWZ3 460 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 SIDT1Q9NXL6 827 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 MTRF1LQ9UGC7 380 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 LNPEPQ9UIQ6 1025 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 PSAT1Q9Y617 370 aa10.06□□□□□ -0.8
TRAPPC12-222ENST00000493792 SPTAN1Q13813 2472 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 A0A0J9YY10 115 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 ARHGEF33A8MVX0 844 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 RASGRF2O14827 1237 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 RAD1O60671 282 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 STK17BO94768 372 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 KIAA0754O94854 1291 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 MPC1LP0DKB6 136 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 CBSLP0DN79 551 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 CBSP35520 551 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 SKIV2L2P42285 1042 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 MAGEA4P43358 317 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 SLC12A2P55011 1212 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 CDKN2DP55273 166 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 TLE1Q04724 770 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 GBX1Q14549 363 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 IL11RAQ14626 422 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 KIR2DS3Q14952 304 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 HECTD2Q5U5R9 776 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 FAM45BPQ6NSW5 357 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 PAQR3Q6TCH7 311 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 C3orf62Q6ZUJ4 267 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 DTX1Q86Y01 620 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 TMEM126BQ8IUX1 230 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 FAM20CQ8IXL6 584 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 CARFQ8N187 725 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 MYO1HQ8N1T3 1032 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 OR9A1PQ8NGU1 263 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 OR2L8Q8NGY9 312 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 FAM45AQ8TCE6 357 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 EEF1AKMT1Q8WVE0 214 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 SLC22A18Q96BI1 424 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 LINGO1Q96FE5 620 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 PSMG3-AS1Q96PY0 264 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 TRAPPC9Q96Q05 1148 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 OR2A14Q96R47 310 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 SLC7A5P2Q9GIP4 190 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 NSMCE4AQ9NXX6 385 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 KLHL42Q9P2K6 505 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 CORO1CQ9ULV4 474 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 KLHL20Q9Y2M5 609 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 MED16Q9Y2X0 877 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 VWA7Q9Y334 891 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 LRRK2Q5S007 2527 aa10.05□□□□□ -0.8
TRAPPC12-222ENST00000493792 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 USP9YO00507 2555 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 FAM95CA0A1B0GW59 222 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 TMEM150CB9EJG8 249 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 ZBTB14O43829 449 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 PSIP1O75475 530 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 SPAG6O75602 509 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 MATN4O95460 622 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 GSTA2P09210 222 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 ATXN8OSP0DMR3 200 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 WT1P19544 449 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 CYP2A7P20853 494 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 PEBP1P30086 187 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 PGGT1BP53609 377 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 IL2P60568 153 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 TUBB4BP68371 445 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 FRG1Q14331 258 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 GRB7Q14451 532 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 SF1Q15637 639 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 TBR1Q16650 682 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 SLC5A12Q1EHB4 618 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 GLE1Q53GS7 698 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 LRRC8EQ6NSJ5 796 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 NEK10Q6ZWH5 1172 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 UBE2R2Q712K3 238 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 GALNT7Q86SF2 657 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 SLC26A11Q86WA9 606 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 ZC3HC1Q86WB0 502 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 SYTL1Q8IYJ3 562 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 NLGN4XQ8N0W4 816 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 D2HGDHQ8N465 521 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 C19orf47Q8N9M1 422 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 LINC01555Q8NAE3 123 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 NLGN4YQ8NFZ3 816 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 ASB11Q8WXH4 323 aa10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 KIAA1143Q96AT1 154 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-222ENST00000493792 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms