RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 VWCEQ96DN2 955 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 CCDC138Q96M89 665 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 VPS35Q96QK1 796 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 PAIP1Q9H074 479 aaKnown RBP9.4□□□□□ -0.9
NPHP3-209ENST00000493732 ING2Q9H160 280 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 NTN4Q9HB63 628 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 SPHK2Q9NRA0 654 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 TDP1Q9NUW8 608 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 TMEM9Q9P0T7 183 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 IFT80Q9P2H3 777 aaPredicted RBP9.4□□□□□ -0.9
NPHP3-209ENST00000493732 DKK3Q9UBP4 350 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 ZNHIT2Q9UHR6 403 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 C3orf18Q9UK00 162 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 SAMD4AQ9UPU9 718 aaKnown RBP9.4□□□□□ -0.9
NPHP3-209ENST00000493732 UPK3BL1B0FP48 263 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 UPK3BL2E5RIL1 263 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 NEDD8-MDP1E9PL57 170 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 RFXANKO14593 260 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 NOL3O60936 208 aaKnown RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 CREG1O75629 220 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SEC24DO94855 1032 aaPredicted RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 CCNDBP1O95273 360 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SNAP29O95721 258 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 CATP04040 527 aaKnown RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 TCF3P15923 654 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 EPORP19235 508 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 PPIBP23284 216 aaKnown RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SLC5A2P31639 672 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 KIR3DL1P43629 444 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ARHGDIAP52565 204 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 RAD23AP54725 363 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 C21orf58P58505 322 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 IRF8Q02556 426 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 IL18R1Q13478 541 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 TUBA3CQ13748 450 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 OTUD3Q5T2D3 398 aaPredicted RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ISLR2Q6UXK2 745 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 GCNT7Q6ZNI0 430 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 THAP5Q7Z6K1 395 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 KIAA0907Q7Z7F0 614 aaPredicted RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SERPINA11Q86U17 422 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 TMEM25Q86YD3 366 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 RASGRP3Q8IV61 690 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 NRSN1Q8IZ57 195 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 C8orf59Q8N0T1 100 aaPredicted RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 KIAA1958Q8N8K9 716 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 OR2A12Q8NGT7 310 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 OR5K1Q8NHB7 308 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ELMO1Q92556 727 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 NELL1Q92832 810 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 GLMNQ92990 594 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 NCLNQ969V3 563 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 VOPP1Q96AW1 172 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 TMEM159Q96B96 161 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 MAGED4Q96JG8 741 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 FCRL1Q96LA6 429 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 FOPNLQ96NB1 174 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 CPPED1Q9BRF8 314 aaPredicted RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SPATA9Q9BWV2 254 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 BRF2Q9HAW0 419 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 FAM120CQ9NX05 1096 aaKnown RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SLC25A37Q9NYZ2 338 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 MARK1Q9P0L2 795 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 CORO2BQ9UQ03 480 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ERVW-1Q9UQF0 538 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 RUVBL1Q9Y265 456 aaKnown RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 PCDHB14Q9Y5E9 798 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 PSMD11O00231 422 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 UPK1AO00322 258 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ATG13O75143 517 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 DNAJB5O75953 348 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SRPRAP08240 638 aaKnown RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 TYRP14679 529 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 AMD1P17707 334 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 HOXA9P31269 272 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 HALP42357 657 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ASMTP46597 345 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 VEGFBP49765 207 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 MTAPQ13126 283 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 CHIT1Q13231 466 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 CBX2Q14781 532 aaPredicted RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 SYTL3Q4VX76 610 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ZC3H12BQ5HYM0 836 aaKnown RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 BROXQ5VW32 411 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
NPHP3-209ENST00000493732 NOXRED1Q6NXP6 359 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 ERAP2Q6P179 960 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 MBOAT1Q6ZNC8 495 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 Q6ZVU0 165 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 CROCCP3Q8IVE0 287 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 MSRB3Q8IXL7 192 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 KRTCAP2Q8N6L1 136 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 VPS37AQ8NEZ2 397 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 PJA1Q8NG27 643 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 FBXO30Q8TB52 745 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 REPS1Q96D71 796 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 PYURFQ96I23 114 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 FBXL20Q96IG2 436 aa9.39□□□□□ -0.91
NPHP3-209ENST00000493732 HHIPQ96QV1 700 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms