RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ERGP11308 486 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 CRABP2P29373 138 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 RPA3P35244 121 aaPredicted RBP13.48□□□□□ -0.25
CCM2-217ENST00000492883 PCBP4P57723 403 aaKnown RBP13.48□□□□□ -0.25
CCM2-217ENST00000492883 TUBB3Q13509 450 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 BMPR2Q13873 1038 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 SUSD1Q6UWL2 747 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 SPATA6LQ8N4H0 392 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 PPFIBP2Q8ND30 876 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 ZNF248Q8NDW4 579 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 ZNF480Q8WV37 535 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 ANKRD49Q8WVL7 239 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 SLC44A1Q8WWI5 657 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 ANKRD7Q92527 254 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 N4BP2L2Q92802 583 aaPredicted RBP13.48□□□□□ -0.25
CCM2-217ENST00000492883 PMEPA1Q969W9 287 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 TCTN2Q96GX1 697 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 PAFAH2Q99487 392 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 ZPBPQ9BS86 351 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 ACAT2Q9BWD1 397 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 TWSG1Q9GZX9 223 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 FGF21Q9NSA1 209 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 INTS7Q9NVH2 962 aaKnown RBP13.48□□□□□ -0.25
CCM2-217ENST00000492883 ARL15Q9NXU5 204 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 FOXJ2Q9P0K8 574 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 CTNNAL1Q9UBT7 734 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCM2-217ENST00000492883 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 ZMIZ1Q9ULJ6 1067 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 BTRCQ9Y297 605 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 RAXQ9Y2V3 346 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 V9GYY5 206 aaPredicted RBP13.48□□□□□ -0.25
CCM2-217ENST00000492883 EXOC1LA0A1B0GW35 172 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 NPEPPSL1A6NEC2 478 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 E7ENX8 843 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 TAF4O00268 1085 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 CDC7O00311 574 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 RRP8O43159 456 aaKnown RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 PRICKLE3O43900 615 aaPredicted RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 FKBP9O95302 570 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 GUCA1CO95843 209 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 ENO2P09104 434 aaPredicted RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 CD82P27701 267 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 PSMB5P28074 263 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 CMPK1P30085 196 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 SERPINB9P50453 376 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 TAP2Q03519 686 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 CSHL1Q14406 222 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 SLC29A2Q14542 456 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 GPR19Q15760 415 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 ZKSCAN8Q15776 578 aaPredicted RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 PHKG1Q16816 387 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 ST3GAL2Q16842 350 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 LGSNQ5TDP6 509 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 TAOK1Q7L7X3 1001 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 CMC1Q7Z7K0 106 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 BPHLQ86WA6 291 aaPredicted RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 ZFAND4Q86XD8 727 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 PPP1R3BQ86XI6 285 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 C19orf47Q8N9M1 422 aaKnown RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 SNIP1Q8TAD8 396 aaKnown RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 ALKBH8Q96BT7 664 aaKnown RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 MIPEPQ99797 713 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 CCDC77Q9BR77 488 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 UNKQ9C0B0 810 aaKnown RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 DERL2Q9GZP9 239 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 FANCEQ9HB96 536 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 UTP6Q9NYH9 597 aaKnown RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 STOX2Q9P2F5 926 aaPredicted RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 TLK1Q9UKI8 766 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 IKZF3Q9UKT9 509 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 NOVA2Q9UNW9 492 aaKnown RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 KLHL20Q9Y2M5 609 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 ZFC3H1O60293 1989 aaKnown RBP13.47□□□□□ -0.25
CCM2-217ENST00000492883 PTPRBP23467 1997 aa13.47□□□□□ -0.25
CCM2-217ENST00000492883 SPTBN2O15020 2390 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 CACNA1AO00555 2505 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 A0A1W2PPV9 198 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 KRT38O76015 456 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 FGF5P12034 268 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 MAGP20916 626 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 IMPA1P29218 277 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 TYK2P29597 1187 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 AP1S2P56377 157 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 ATP6V0D1P61421 351 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 VSNL1P62760 191 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 NAE1Q13564 534 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 TSNQ15631 228 aaKnown RBP13.46□□□□□ -0.25
CCM2-217ENST00000492883 ERCC6LQ2NKX8 1250 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 KIAA1614Q5VZ46 1190 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 FIGLAQ6QHK4 219 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 AGTRAPQ6RW13 159 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 MBOAT1Q6ZNC8 495 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 LRRC69Q6ZNQ3 347 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 CDHR3Q6ZTQ4 885 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 FRA10AC1Q70Z53 315 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 TBC1D1Q86TI0 1168 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms