RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 LRFN4Q6PJG9 635 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ZNF367Q7RTV3 350 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MRPL10Q7Z7H8 261 aaKnown RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 DDX53Q86TM3 631 aaKnown RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 CCDC71Q8IV32 467 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 P3H2Q8IVL5 708 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 SPATA6LQ8N4H0 392 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 GPR152Q8TDT2 470 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 CENPIQ92674 756 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 DNASE1L2Q92874 299 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MRGPRX2Q96LB1 330 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 TEX37Q96LM6 180 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 COL21A1Q96P44 957 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 CHCHD6Q9BRQ6 235 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 TUBB1Q9H4B7 451 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 RIBC2Q9H4K1 309 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ASB7Q9H672 318 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MCUBQ9NWR8 336 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 COA4Q9NYJ1 87 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 TMCC3Q9ULS5 477 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 CMAHPQ9Y471 501 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 COL2A1P02458 1487 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 EFCAB10A6NFE3 127 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 KRBOX1C9JBD0 128 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 IFRD1O00458 451 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 AZIN1O14977 448 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 DGAT1O75907 488 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 STBD1O95210 358 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 TGM6O95932 706 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 APOC1P02654 83 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 NCF1P14598 390 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 CYP2B6P20813 491 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 HLA-FP30511 346 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 CLCN3P51790 818 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 HERVK_113P63132 956 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 SH3BP2P78314 561 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 PTPN11Q06124 597 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 SIM2Q14190 667 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 EIF4HQ15056 248 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 TAF12Q16514 161 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 DUSP6Q16828 381 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 PAN2Q504Q3 1202 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 CERCAMQ5T4B2 595 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 TRILQ7L0X0 811 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 RRM2BQ7LG56 351 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 ATCAYQ86WG3 371 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 TTC29Q8NA56 475 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 ZNF548Q8NEK5 533 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 RAET1EQ8TD07 263 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 RIT1Q92963 219 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 TUBGCP3Q96CW5 907 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 UROC1Q96N76 676 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 ERVK-6Q9BXR3 956 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 RACGAP1Q9H0H5 632 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 SPON1Q9HCB6 807 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 CD93Q9NPY3 652 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 RBFOX1Q9NWB1 397 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 UTS2RQ9UKP6 389 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 SSC5DA1L4H1 1573 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 hCG_1807616A0A1W2PRN6 198 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 SMLR1H3BR10 107 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 K7ERI5 159 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 CD3EAPO15446 510 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 MFSD11O43934 449 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 PCDHGA12O60330 932 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 SOX11P35716 441 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 OLIG2Q13516 323 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 EXOSC2Q13868 293 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 CAMK1Q14012 370 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 GRIK4Q16099 956 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 ZNF699Q32M78 642 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 EML3Q32P44 896 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 PTCHD3Q3KNS1 767 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 PDZK1Q5T2W1 519 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 USP50Q70EL3 339 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 ZFAND4Q86XD8 727 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 CCDC117Q8IWD4 279 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 ENTHD1Q8IYW4 607 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 STX19Q8N4C7 294 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 ATAD1Q8NBU5 361 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 OR6M1Q8NGM8 313 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 UTP15Q8TED0 518 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 ZNF431Q8TF32 576 aaPredicted RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 BARHL1Q9BZE3 327 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 SYNDIG1Q9H7V2 258 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 ZFP64Q9NPA5 681 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 DCAF13Q9NV06 445 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 HPF1Q9NWY4 346 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 EMC3Q9P0I2 261 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 GIMAP2Q9UG22 337 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 PHF11Q9UIL8 331 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 ING4Q9UNL4 249 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 MRPS7Q9Y2R9 242 aaKnown RBP9.47□□□□□ -0.89
VPS8-225ENST00000492449 MICAL3Q7RTP6 2002 aa9.47□□□□□ -0.89
VPS8-225ENST00000492449 ADAMTSL1Q8N6G6 1762 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 PQLC2LA1A4F0 135 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 MFSD2BA6NFX1 497 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 M0QYV0 167 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 HCN1O60741 890 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms