RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 VWA5B1Q5TIE3 1220 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 FIGLAQ6QHK4 219 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 COX15Q7KZN9 410 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 OVCH1Q7RTY7 1134 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 ATCAYQ86WG3 371 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 RAB43Q86YS6 212 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 KRT222Q8N1A0 295 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 PRELID2Q8N945 189 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 OR2A1Q8NGT9 310 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 CPT1CQ8TCG5 803 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 MAIP1Q8WWC4 291 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 PNPLA2Q96AD5 504 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 RAD51AP1Q96B01 352 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 MFSD3Q96ES6 412 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 FER1L6-AS2Q96M78 137 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 PANX3Q96QZ0 392 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 RAB11FIP5Q9BXF6 653 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 ZNF552Q9H707 407 aaPredicted RBP8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 HOMER3Q9NSC5 361 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 P4HTMQ9NXG6 502 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 GPR83Q9NYM4 423 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 IL1RAPL1Q9NZN1 696 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 KLHL42Q9P2K6 505 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 DHCR7Q9UBM7 475 aaKnown RBP8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 GNPTGQ9UJJ9 305 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 ANAPC5Q9UJX4 755 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 MRFAP1Q9Y605 127 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 NOTCH2Q04721 2471 aa8.04□□□□□ -1.12
SMARCB1-207ENST00000491967 IGLV3-12A0A075B6K2 115 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 A0A1B0GX78 115 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 TCRBV7S3A2A0A539 114 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 WIPF3A6NGB9 483 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 TTLL8A6PVC2 850 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 H3BMM5 538 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 AGPSO00116 658 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 DSCR3O14972 297 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 ZNF185O15231 689 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 KLHL41O60662 606 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 VAPBO95292 243 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 FGGP02679 453 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 ESR1P03372 595 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 CCDC175P0C221 793 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 MLNP12872 115 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 GP1BBP13224 206 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 CCNFP41002 786 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 FOLR3P41439 243 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 UQCRFS1P47985 274 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 KCNJ1P48048 391 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 SESN2P58004 480 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 MYBPC3Q14896 1274 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 TMED2Q15363 201 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 INPP5JQ15735 1006 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 CYP1B1Q16678 543 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 PLEKHN1Q494U1 663 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 CCSMST1Q4G0I0 132 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 ZC3H12BQ5HYM0 836 aaKnown RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 TCTE1Q5JU00 501 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 C1orf189Q5VU69 101 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 SLC6A19Q695T7 634 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 PTRHD1Q6GMV3 140 aaKnown RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 KIAA0930Q6ICG6 404 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 FBXO42Q6P3S6 717 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 IGFL2Q6UWQ7 119 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 CENPUQ71F23 418 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 CAND1Q86VP6 1230 aaKnown RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 HOOK3Q86VS8 718 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 LRRC8AQ8IWT6 810 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 FAM20CQ8IXL6 584 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 RASGEF1CQ8N431 466 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 ARHGEF39Q8N4T4 335 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 FBXO15Q8NCQ5 510 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 MCUQ8NE86 351 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 TRIM58Q8NG06 486 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 DLG3Q92796 817 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 IL17FQ96PD4 163 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 SPSB2Q99619 263 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 NDC1Q9BTX1 674 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 INTS7Q9NVH2 962 aaKnown RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 SYBUQ9NX95 663 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 IFT80Q9P2H3 777 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 TTC7AQ9ULT0 858 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 KLHL20Q9Y2M5 609 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 MED16Q9Y2X0 877 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 PTRH2Q9Y3E5 179 aaKnown RBP8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 SVILO95425 2214 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 ZGRF1Q86YA3 2104 aa8.03□□□□□ -1.12
SMARCB1-207ENST00000491967 FAM237BA0A1B0GVD1 139 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 A0A1W2PQ72 361 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 MAGEB16A2A368 324 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 OR2A25A4D2G3 310 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 TCP11X1B4DZS4 312 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 MYO1CO00159 1063 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 SOCS6O14544 535 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 PSIP1O75475 530 aaKnown RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 NDUFS3O75489 264 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 MED26O95402 600 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 PIM1P11309 404 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 OGNP20774 298 aaKnown RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 GNLYP22749 145 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 MGAT1P26572 445 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms