RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ILF3Q12906 894 aaKnown RBP eCLIP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ILKQ13418 452 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 SEPT6Q14141 434 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 PLA2G4EQ3MJ16 856 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 SLC9B1Q4ZJI4 515 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 GPRC6AQ5T6X5 926 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 CRTC3Q6UUV7 619 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 BNC2Q6ZN30 1099 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 C11orf96Q7Z7L8 435 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 C17orf82Q86X59 251 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ALDH16A1Q8IZ83 802 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 EFCAB3Q8N7B9 438 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 RASGEF1AQ8N9B8 481 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 DNAAF3Q8N9W5 541 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 RP9Q8TA86 221 aaKnown RBP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ZDHHC1Q8WTX9 485 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 RBBP8Q99708 897 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ILKAPQ9H0C8 392 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ASB8Q9H765 288 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 RMI1Q9H9A7 625 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 SLC2A6Q9UGQ3 507 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 KCNK6Q9Y257 313 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ASPMQ8IZT6 3477 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 TRBV23OR9-2A0A075B6M9 112 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 CCDC160A6NGH7 325 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 CDK14O94921 469 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 MPOP05164 745 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ERVK-10P10266 1014 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 PSMA3P25788 255 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ADSLP30566 484 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 SERPINB5P36952 375 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 DUSP3P51452 185 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 CTSCP53634 463 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 LIMK2P53671 638 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 B4GALNT1Q00973 533 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 NFATC2Q13469 925 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 HES3Q5TGS1 186 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 RBM44Q6ZP01 1051 aaKnown RBP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 CMC1Q7Z7K0 106 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 DDHD1Q8NEL9 900 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 CCDC74AQ96AQ1 378 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 CDKN2AIPNLQ96HQ2 116 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ZNF696Q9H7X3 374 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 SMOXQ9NWM0 555 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 SYBUQ9NX95 663 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 TBC1D29Q9UFV1 150 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 NEUROG3Q9Y4Z2 214 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 AP4B1Q9Y6B7 739 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 RNF215Q9Y6U7 377 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 OR51F1A6NGY5 319 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 PRR19A6NJB7 356 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 HDAC3O15379 428 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 VEGFDO43915 354 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 APOA4P06727 396 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 GP1BAP07359 652 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 PIK3R1P27986 724 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 MC4RP32245 332 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 CYLC2Q14093 348 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-219ENST00000491747 TBC1D25Q3MII6 688 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 C14orf28Q4W4Y0 310 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 SNX32Q86XE0 403 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 DSELQ8IZU8 1212 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 OR13J1Q8NGT2 312 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 STYXQ8WUJ0 223 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 GLMNQ92990 594 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 CCDC3Q9BQI4 270 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 OCEL1Q9H607 264 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 ZNF358Q9NW07 568 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 IRAK4Q9NWZ3 460 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 NCKIPSDQ9NZQ3 722 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 APPL1Q9UKG1 709 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 MSRB2Q9Y3D2 182 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 A0A096LPK6 155 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 A6NCN8 305 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 H7C0S8 307 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 MATN2O00339 956 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 SGTAO43765 313 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 ZNF7P17097 686 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-219ENST00000491747 PPARGP37231 505 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-219ENST00000491747 HADHAP40939 763 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 RPIAP49247 311 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 MRPS22P82650 360 aaKnown RBP9.16□□□□□ -0.94
BRCA1-219ENST00000491747 CAMK2BQ13554 666 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 LRP8Q14114 963 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 ADRM1Q16186 407 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 NADK2Q4G0N4 442 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 PIGGQ5H8A4 983 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 LDLRAP1Q5SW96 308 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 CDCP2Q5VXM1 449 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 KLC3Q6P597 504 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 XKR5Q6UX68 686 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 DET1Q7L5Y6 550 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 STRA8Q7Z7C7 330 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 LRRTM4Q86VH4 590 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 PIANPQ8IYJ0 282 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 PGAM4Q8N0Y7 254 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 ARL14Q8N4G2 192 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
BRCA1-219ENST00000491747 MAPK15Q8TD08 544 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 LZICQ8WZA0 190 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms