RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DHX34Q14147 1143 aaKnown RBP17.29■□□□□ 0.36
HMGN1-219ENST00000491183 ACSBG2Q5FVE4 666 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 NAT8LQ8N9F0 302 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 HMGCLL1Q8TB92 370 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 ZNF669Q96BR6 464 aaPredicted RBP17.29■□□□□ 0.36
HMGN1-219ENST00000491183 SERPINB12Q96P63 405 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 OSBPL9Q96SU4 736 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 NDC1Q9BTX1 674 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 RAB11FIP5Q9BXF6 653 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 IRAK4Q9NWZ3 460 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 SRPK3Q9UPE1 567 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 PCDHGA9Q9Y5G4 932 aaKnown RBP17.29■□□□□ 0.36
HMGN1-219ENST00000491183 A0A1W2PPV9 198 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 H3BMM5 538 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 PGRMC1O00264 195 aaKnown RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 PFDN6O15212 129 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 ZNF185O15231 689 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 PSMB5P28074 263 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 ATP5DP30049 168 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 MAGEA3P43357 314 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 FOXL2P58012 376 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 ATP1A4Q13733 1029 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 FASTKQ14296 549 aaKnown RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 SSPNQ14714 243 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 SLC9A5Q14940 896 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 NKAIN1Q4KMZ8 207 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 PAPD7Q5XG87 772 aaKnown RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 MRPL14Q6P1L8 145 aaKnown RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 DENND6AQ8IWF6 608 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 OR2A1Q8NGT9 310 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 ACTRT1Q8TDG2 376 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 SIGLEC10Q96LC7 697 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 FOPNLQ96NB1 174 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 NAP1L3Q99457 506 aaPredicted RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 SLC30A3Q99726 388 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 C17orf62Q9BQA9 187 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 XAB2Q9HCS7 855 aaKnown RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 TXLNGQ9NUQ3 528 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 INTS7Q9NVH2 962 aaKnown RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 SAMD15Q9P1V8 674 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 IFT80Q9P2H3 777 aaPredicted RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 PADI2Q9Y2J8 665 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 PTRH2Q9Y3E5 179 aaKnown RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 MRFAP1Q9Y605 127 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 ANKRD12Q6UB98 2062 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 PCM1Q15154 2024 aa17.28■□□□□ 0.36
HMGN1-219ENST00000491183 ASH1LQ9NR48 2969 aaKnown RBP17.28■□□□□ 0.36
HMGN1-219ENST00000491183 TARM1B6A8C7 271 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 CTSVO60911 334 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 PHF2O75151 1096 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 FKBP9O95302 570 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 ITGAXP20702 1163 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 MCM3P25205 808 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 OTX2P32243 289 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 CCNFP41002 786 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 PGDP52209 483 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 YBX1P67809 324 aaKnown RBP17.27■□□□□ 0.36
HMGN1-219ENST00000491183 CTBP1Q13363 440 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 CYP2A13Q16696 494 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 KLHL38Q2WGJ6 581 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.27■□□□□ 0.36
HMGN1-219ENST00000491183 ZNF549Q6P9A3 640 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 MED25Q71SY5 747 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 FDCSPQ8NFU4 85 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 OR2L3Q8NG85 312 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 ZUFSPQ96AP4 578 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 ZNF285Q96NJ3 590 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 KCNF1Q9H3M0 494 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 ENAMQ9NRM1 1142 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 INTS10Q9NVR2 710 aaKnown RBP17.27■□□□□ 0.36
HMGN1-219ENST00000491183 GPN3Q9UHW5 284 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-219ENST00000491183 PLAAQ9Y263 795 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 MED16Q9Y2X0 877 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 KLK4Q9Y5K2 254 aa17.27■□□□□ 0.36
HMGN1-219ENST00000491183 UBR5O95071 2799 aaPredicted RBP17.27■□□□□ 0.35
HMGN1-219ENST00000491183 FLNBO75369 2602 aaKnown RBP17.26■□□□□ 0.35
HMGN1-219ENST00000491183 ARHGEF33A8MVX0 844 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 NRP2O60462 931 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 PSIP1O75475 530 aaKnown RBP17.26■□□□□ 0.35
HMGN1-219ENST00000491183 ALAS2P22557 587 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 CLCN7P51798 805 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 MLLT10P55197 1068 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 ZC3H12BQ5HYM0 836 aaKnown RBP17.26■□□□□ 0.35
HMGN1-219ENST00000491183 ZNF470Q6ECI4 717 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 TTLL10Q6ZVT0 673 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 RAB43Q86YS6 212 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 RAB42Q8N4Z0 105 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 TMEM102Q8N9M5 508 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-219ENST00000491183 OR9A1PQ8NGU1 263 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 OR2Y1Q8NGV0 311 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 MAGEC3Q8TD91 643 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 MIPEPQ99797 713 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 NUDT9Q9BW91 350 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 FBXO6Q9NRD1 293 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-219ENST00000491183 TRMT1Q9NXH9 659 aaKnown RBP17.26■□□□□ 0.35
HMGN1-219ENST00000491183 SPATA7Q9P0W8 599 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 NDOR1Q9UHB4 597 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 SNX12Q9UMY4 172 aa17.26■□□□□ 0.35
HMGN1-219ENST00000491183 CTAGE9A4FU28 777 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms