RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 E7ESA3 106 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 TK2O00142 265 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 MEN1O00255 615 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 KDM1AO60341 852 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 MT-ND3P03897 115 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 ITGB2P05107 769 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CAPN1P07384 714 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CBSLP0DN79 551 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CYP2A7P20853 494 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CBSP35520 551 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CCNFP41002 786 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 ITGA1P56199 1179 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 ARL4CP56559 192 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 NFKB2Q00653 900 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 ERV3-1Q14264 604 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 SF1Q15637 639 aaKnown RBP17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CYP2A13Q16696 494 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 DEFB109BQ30KR1 87 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 TTC23LQ6PF05 361 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 TMEM151BQ8IW70 566 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 DSELQ8IZU8 1212 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 PPFIBP2Q8ND30 876 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 FBXO36Q8NEA4 188 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 OR2A1Q8NGT9 310 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 OR9A1PQ8NGU1 263 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 HMGCLL1Q8TB92 370 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 DLG3Q92796 817 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CLIP3Q96DZ5 547 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 FOPNLQ96NB1 174 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 ERP44Q9BS26 406 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 NAT9Q9BTE0 207 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CHRNA10Q9GZZ6 450 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 CCDC68Q9H2F9 335 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 SYTL2Q9HCH5 934 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 PPANQ9NQ55 473 aaKnown RBP17.44■□□□□ 0.38
COL9A3-214ENST00000490398 SERTAD3Q9UJW9 196 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 PSAT1Q9Y617 370 aa17.44■□□□□ 0.38
COL9A3-214ENST00000490398 SNRNP200O75643 2136 aaKnown RBP17.44■□□□□ 0.38
COL9A3-214ENST00000490398 FAM187AA6NFU0 413 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 EIF4E1BA6NMX2 242 aaKnown RBP17.43■□□□□ 0.38
COL9A3-214ENST00000490398 E7EQ34 232 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 MYO1CO00159 1063 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 PIAS1O75925 651 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 ATXN8OSP0DMR3 200 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 ERGP11308 486 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 C1orf189Q5VU69 101 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 ZNF385CQ66K41 422 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-214ENST00000490398 DUPD1Q68J44 220 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 FIGLAQ6QHK4 219 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 SUSD1Q6UWL2 747 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 ASB11Q8WXH4 323 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 C16orf45Q96MC5 204 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-214ENST00000490398 EFHD1Q9BUP0 239 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 ACAT2Q9BWD1 397 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 ACTL8Q9H568 366 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 SYNPO2LQ9H987 977 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 SPATA7Q9P0W8 599 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-214ENST00000490398 KLHL42Q9P2K6 505 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 ADAMTS6Q9UKP5 1117 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 PCDHGA6Q9Y5G7 932 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 COMMD10Q9Y6G5 202 aa17.43■□□□□ 0.38
COL9A3-214ENST00000490398 GFYI3L273 518 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 SMAPO00193 183 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 CTSVO60911 334 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 VPS26AO75436 327 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 OR2B3O76000 313 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 MPC1LP0DKB6 136 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 FOXL2P58012 376 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 IL10RAQ13651 578 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 TTLL9Q3SXZ7 439 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 BORAQ6PGQ7 559 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 PAQR3Q6TCH7 311 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 FAM198BQ6UWH4 519 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 CAPN12Q6ZSI9 719 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 NEK10Q6ZWH5 1172 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 MCATQ8IVS2 390 aaKnown RBP17.42■□□□□ 0.38
COL9A3-214ENST00000490398 SYTL1Q8IYJ3 562 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 ZNF655Q8N720 491 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-214ENST00000490398 OR2L3Q8NG85 312 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 ZNF480Q8WV37 535 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 EEF1AKMT1Q8WVE0 214 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 LRRC39Q96DD0 335 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 MED8Q96G25 268 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 LRFN5Q96NI6 719 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 OLFM1Q99784 485 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 SLC6A20Q9NP91 592 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 SMYD2Q9NRG4 433 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 STARD5Q9NSY2 213 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 EURLQ9NYK6 297 aa17.42■□□□□ 0.38
COL9A3-214ENST00000490398 CDC14CA4D256 554 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 MAP3K7O43318 606 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 CREG1O75629 220 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 SLC16A8O95907 504 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 CATP04040 527 aaKnown RBP17.41■□□□□ 0.38
COL9A3-214ENST00000490398 GCGRP47871 477 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 HECTD2Q5U5R9 776 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 ZNF572Q7Z3I7 529 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-214ENST00000490398 LRRC56Q8IYG6 542 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-214ENST00000490398 ZBED8Q8IZ13 594 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms