RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 C19orf47Q8N9M1 422 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 MDS2Q8NDY4 140 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 SLC30A5Q8TAD4 765 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 SUN3Q8TAQ9 357 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 ARRDC2Q8TBH0 407 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 CCHCR1Q8TD31 782 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 TMEM158Q8WZ71 300 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 SEC16BQ96JE7 1060 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 VPS50Q96JG6 964 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 C12orf66Q96MD2 445 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 PWWP2AQ96N64 755 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 PEBP4Q96S96 227 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 EIF3CQ99613 913 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 CNPY3Q9BT09 278 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 POLR1EQ9GZS1 481 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 WWP1Q9H0M0 922 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 DHX35Q9H5Z1 703 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 PCDH9Q9HC56 1237 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 SRA1Q9HD15 236 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 DMRT3Q9NQL9 472 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 SEPT11Q9NVA2 429 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 NXT1Q9UKK6 140 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 NSG1A0A0A6YYJ2 146 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 A0A1B0GX78 115 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 SIGLEC16A6NMB1 481 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 A6NNC1 897 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 IDSB3KWA1 339 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 ANKRD66B4E2M5 251 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 MAP2K7O14733 419 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 ZSCAN22P10073 491 aaPredicted RBP6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 ITGAMP11215 1152 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 CHRNB2P17787 502 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 CD53P19397 219 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 NSG1P42857 185 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 HCAR3P49019 387 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 CDH6P55285 790 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 PSMA6P60900 246 aaKnown RBP6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 FMO1Q01740 532 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 OGDHQ02218 1023 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 KRTAP1-1Q07627 177 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 KLC1Q07866 573 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 NIPAL4Q0D2K0 466 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 KEAP1Q14145 624 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 ATP13A5Q4VNC0 1218 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 Q5PR19 223 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 KLHL10Q6JEL2 608 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 SPESP1Q6UW49 350 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 ARSKQ6UWY0 536 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 TTLL10Q6ZVT0 673 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 NEK10Q6ZWH5 1172 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 NDUFAF7Q7L592 441 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 TRIM73Q86UV7 250 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 TMTC1Q8IUR5 882 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 TRIM42Q8IWZ5 723 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 DNAJC22Q8N4W6 341 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 ATPAF2Q8N5M1 289 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 RASGEF1AQ8N9B8 481 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 ACVR1CQ8NER5 493 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 GOT1L1Q8NHS2 421 aaPredicted RBP6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 FLVCR1-AS1Q8TAF5 88 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 FAM57AQ8TBR7 257 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 LCN9Q8WX39 176 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 N4BP2L2Q92802 583 aaPredicted RBP6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 SCMH1Q96GD3 660 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 CRB3Q9BUF7 120 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 SNRNP25Q9BV90 132 aaKnown RBP6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 SRMSQ9H3Y6 488 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 PLEKHF2Q9H8W4 249 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 CRIM1Q9NZV1 1036 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 CWC15Q9P013 229 aaKnown RBP6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 ROS1P08922 2347 aa6.77□□□□□ -1.33
PDLIM1-203ENST00000490391 USF3Q68DE3 2245 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 IGHV1-45A0A0A0MS14 117 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 DSCR3O14972 297 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 SMAD7O15105 426 aaKnown RBP6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 TTI1O43156 1089 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 GPR39O43194 453 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 DAPK3O43293 454 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 KCNAB3O43448 404 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 PRPSAP2O60256 369 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 GADD45BO75293 160 aaPredicted RBP6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 MT-CYBP00156 380 aaPredicted RBP6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 MMP2P08253 660 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 NDUFS1P28331 727 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 PTGER1P34995 402 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 CARSP49589 748 aaKnown RBP6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 DCAF7P61962 342 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 STIM1Q13586 685 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 PKP1Q13835 747 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 SNTB1Q13884 538 aaKnown RBP6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 GTF2H3Q13889 308 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 SYCP1Q15431 976 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 TFDP3Q5H9I0 405 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 PPP6R3Q5H9R7 873 aaPredicted RBP6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 EMC4Q5J8M3 183 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 TXNRD3NBQ6F5E7 133 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 TMEM211Q6ICI0 200 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 ACAD10Q6JQN1 1059 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 HMBOX1Q6NT76 420 aa6.76□□□□□ -1.33
PDLIM1-203ENST00000490391 CNSTQ6PJW8 725 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms